Gene : AT1G09910 A. thaliana TAIR10
Defline:  (1 of 1) PTHR32018//PTHR32018:SF8 - FAMILY NOT NAMED // RHAMNOGALACTURONATE LYASE-LIKE PROTEIN Genomic Order:  952
Name:  ? AT1G09910 Secondary Identifier:  ? PAC:19653276
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G09910 0.5kb upstream 0.5kb upstream 5007 true Chr1: 3220035-3225041 Arabidopsis thaliana
AT1G09910 0.5kb upstream 0.5kb upstream 500 false Chr1: 3224542-3225041 Arabidopsis thaliana
AT1G09910 0.5kb downstream 0.5kb downstream 5007 true Chr1: 3219535-3224541 Arabidopsis thaliana
AT1G09910 0.5kb downstream 0.5kb downstream 500 false Chr1: 3219535-3220034 Arabidopsis thaliana
AT1G09910 1.0kb upstream 1.0kb upstream 5507 true Chr1: 3220035-3225541 Arabidopsis thaliana
AT1G09910 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3224542-3225541 Arabidopsis thaliana
AT1G09910 1.0kb downstream 1.0kb downstream 5507 true Chr1: 3219035-3224541 Arabidopsis thaliana
AT1G09910 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3219035-3220034 Arabidopsis thaliana
AT1G09910 2.0kb upstream 2.0kb upstream 6507 true Chr1: 3220035-3226541 Arabidopsis thaliana
AT1G09910 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3224542-3226541 Arabidopsis thaliana
AT1G09910 2.0kb downstream 2.0kb downstream 6507 true Chr1: 3218035-3224541 Arabidopsis thaliana
AT1G09910 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3218035-3220034 Arabidopsis thaliana
AT1G09910 5.0kb upstream 5.0kb upstream 9507 true Chr1: 3220035-3229541 Arabidopsis thaliana
AT1G09910 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3224542-3229541 Arabidopsis thaliana
AT1G09910 5.0kb downstream 5.0kb downstream 9507 true Chr1: 3215035-3224541 Arabidopsis thaliana
AT1G09910 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3215035-3220034 Arabidopsis thaliana
AT1G09910 10.0kb upstream 10.0kb upstream 14507 true Chr1: 3220035-3234541 Arabidopsis thaliana
AT1G09910 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3224542-3234541 Arabidopsis thaliana
AT1G09910 10.0kb downstream 10.0kb downstream 14507 true Chr1: 3210035-3224541 Arabidopsis thaliana
AT1G09910 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3210035-3220034 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041153 5273 Angiosperm View MSA
122368597 5261 Brassicaceae View MSA
123835035 5264 Brassicales-Malvales View MSA
124343927 5266 SBM View MSA
124239399 5268 Malvidae View MSA
124050367 5270 Rosid View MSA
123741436 5271 Pentapetalae View MSA
122791943 5272 Eudicot View MSA
121347296 5274 Embryophyte View MSA
123380523 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.213       Low
cufflinks 9.46       High
cufflinks 7.411        
cufflinks 9.337       High
cufflinks 8.35        
cufflinks 6.756        

0 Strain