Gene : Cucsa.162690 C. sativus v1.0
Defline:  (1 of 1) PTHR11879:SF1 - ASPARTATE AMINOTRANSFERASE, CHLOROPLASTIC Genomic Order:  301
Name:  ? Cucsa.162690 Secondary Identifier:  ? PAC:16965719
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus ASPARTATE-DEG1-PWY Cucumis sativus pathologic  
Csativus ASPARTATESYN-PWY Cucumis sativus pathologic  
Csativus PWY-3001 Cucumis sativus pathologic  
Csativus PWY-7115 Cucumis sativus pathologic  
Csativus PWY-7117 Cucumis sativus pathologic  
Csativus THRESYN-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.162690 0.5kb upstream 0.5kb upstream 4282 true scaffold01144: 2224691-2228972 Cucumis sativus
Cucsa.162690 0.5kb upstream 0.5kb upstream 500 false scaffold01144: 2228473-2228972 Cucumis sativus
Cucsa.162690 0.5kb downstream 0.5kb downstream 4282 true scaffold01144: 2224191-2228472 Cucumis sativus
Cucsa.162690 0.5kb downstream 0.5kb downstream 500 false scaffold01144: 2224191-2224690 Cucumis sativus
Cucsa.162690 1.0kb upstream 1.0kb upstream 4782 true scaffold01144: 2224691-2229472 Cucumis sativus
Cucsa.162690 1.0kb upstream 1.0kb upstream 1000 false scaffold01144: 2228473-2229472 Cucumis sativus
Cucsa.162690 1.0kb downstream 1.0kb downstream 4782 true scaffold01144: 2223691-2228472 Cucumis sativus
Cucsa.162690 1.0kb downstream 1.0kb downstream 1000 false scaffold01144: 2223691-2224690 Cucumis sativus
Cucsa.162690 2.0kb upstream 2.0kb upstream 5782 true scaffold01144: 2224691-2230472 Cucumis sativus
Cucsa.162690 2.0kb upstream 2.0kb upstream 2000 false scaffold01144: 2228473-2230472 Cucumis sativus
Cucsa.162690 2.0kb downstream 2.0kb downstream 5782 true scaffold01144: 2222691-2228472 Cucumis sativus
Cucsa.162690 2.0kb downstream 2.0kb downstream 2000 false scaffold01144: 2222691-2224690 Cucumis sativus
Cucsa.162690 5.0kb upstream 5.0kb upstream 8782 true scaffold01144: 2224691-2233472 Cucumis sativus
Cucsa.162690 5.0kb upstream 5.0kb upstream 5000 false scaffold01144: 2228473-2233472 Cucumis sativus
Cucsa.162690 5.0kb downstream 5.0kb downstream 8782 true scaffold01144: 2219691-2228472 Cucumis sativus
Cucsa.162690 5.0kb downstream 5.0kb downstream 5000 false scaffold01144: 2219691-2224690 Cucumis sativus
Cucsa.162690 10.0kb upstream 10.0kb upstream 13782 true scaffold01144: 2224691-2238472 Cucumis sativus
Cucsa.162690 10.0kb upstream 10.0kb upstream 10000 false scaffold01144: 2228473-2238472 Cucumis sativus
Cucsa.162690 10.0kb downstream 10.0kb downstream 13782 true scaffold01144: 2214691-2228472 Cucumis sativus
Cucsa.162690 10.0kb downstream 10.0kb downstream 10000 false scaffold01144: 2214691-2224690 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303069 5265 Fabidae View MSA
124066749 5270 Rosid View MSA
123740507 5271 Pentapetalae View MSA
122797537 5272 Eudicot View MSA
122048100 5273 Angiosperm View MSA
121346908 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain