Gene : Cucsa.166840 C. sativus v1.0
Defline:  (1 of 1) PTHR32448:SF25 - FAD-BINDING BERBERINE FAMILY PROTEIN-RELATED Genomic Order:  13
Name:  ? Cucsa.166840 Secondary Identifier:  ? PAC:16966197
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.166840 0.5kb upstream 0.5kb upstream 4414 true scaffold01154: 223389-227802 Cucumis sativus
Cucsa.166840 0.5kb upstream 0.5kb upstream 500 false scaffold01154: 223389-223888 Cucumis sativus
Cucsa.166840 0.5kb downstream 0.5kb downstream 4414 true scaffold01154: 223889-228302 Cucumis sativus
Cucsa.166840 0.5kb downstream 0.5kb downstream 500 false scaffold01154: 227803-228302 Cucumis sativus
Cucsa.166840 1.0kb upstream 1.0kb upstream 4914 true scaffold01154: 222889-227802 Cucumis sativus
Cucsa.166840 1.0kb upstream 1.0kb upstream 1000 false scaffold01154: 222889-223888 Cucumis sativus
Cucsa.166840 1.0kb downstream 1.0kb downstream 4914 true scaffold01154: 223889-228802 Cucumis sativus
Cucsa.166840 1.0kb downstream 1.0kb downstream 1000 false scaffold01154: 227803-228802 Cucumis sativus
Cucsa.166840 2.0kb upstream 2.0kb upstream 5914 true scaffold01154: 221889-227802 Cucumis sativus
Cucsa.166840 2.0kb upstream 2.0kb upstream 2000 false scaffold01154: 221889-223888 Cucumis sativus
Cucsa.166840 2.0kb downstream 2.0kb downstream 5914 true scaffold01154: 223889-229802 Cucumis sativus
Cucsa.166840 2.0kb downstream 2.0kb downstream 2000 false scaffold01154: 227803-229802 Cucumis sativus
Cucsa.166840 5.0kb upstream 5.0kb upstream 8914 true scaffold01154: 218889-227802 Cucumis sativus
Cucsa.166840 5.0kb upstream 5.0kb upstream 5000 false scaffold01154: 218889-223888 Cucumis sativus
Cucsa.166840 5.0kb downstream 5.0kb downstream 8914 true scaffold01154: 223889-232802 Cucumis sativus
Cucsa.166840 5.0kb downstream 5.0kb downstream 5000 false scaffold01154: 227803-232802 Cucumis sativus
Cucsa.166840 10.0kb upstream 10.0kb upstream 13914 true scaffold01154: 213889-227802 Cucumis sativus
Cucsa.166840 10.0kb upstream 10.0kb upstream 10000 false scaffold01154: 213889-223888 Cucumis sativus
Cucsa.166840 10.0kb downstream 10.0kb downstream 13914 true scaffold01154: 223889-237802 Cucumis sativus
Cucsa.166840 10.0kb downstream 10.0kb downstream 10000 false scaffold01154: 227803-237802 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303506 5265 Fabidae View MSA
124073891 5270 Rosid View MSA
123750008 5271 Pentapetalae View MSA
122797707 5272 Eudicot View MSA
122049918 5273 Angiosperm View MSA
121351151 5274 Embryophyte View MSA
123426970 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain