Gene : Cucsa.179860 C. sativus v1.0
Defline:  (1 of 1) 2.5.1.18//2.5.1.32 - Glutathione transferase / S-(hydroxyalkyl)glutathione lyase // 15-cis-phytoene synthase / PSase Genomic Order:  22
Name:  ? Cucsa.179860 Secondary Identifier:  ? PAC:16967235
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus CAROTENOID-PWY Cucumis sativus pathologic  
Csativus PWY-6475 Cucumis sativus pathologic  
Csativus PWY-6842 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.179860 0.5kb upstream 0.5kb upstream 4048 true scaffold01233: 222987-227034 Cucumis sativus
Cucsa.179860 0.5kb upstream 0.5kb upstream 500 false scaffold01233: 222987-223486 Cucumis sativus
Cucsa.179860 0.5kb downstream 0.5kb downstream 4048 true scaffold01233: 223487-227534 Cucumis sativus
Cucsa.179860 0.5kb downstream 0.5kb downstream 500 false scaffold01233: 227035-227534 Cucumis sativus
Cucsa.179860 1.0kb upstream 1.0kb upstream 4548 true scaffold01233: 222487-227034 Cucumis sativus
Cucsa.179860 1.0kb upstream 1.0kb upstream 1000 false scaffold01233: 222487-223486 Cucumis sativus
Cucsa.179860 1.0kb downstream 1.0kb downstream 4548 true scaffold01233: 223487-228034 Cucumis sativus
Cucsa.179860 1.0kb downstream 1.0kb downstream 1000 false scaffold01233: 227035-228034 Cucumis sativus
Cucsa.179860 2.0kb upstream 2.0kb upstream 5548 true scaffold01233: 221487-227034 Cucumis sativus
Cucsa.179860 2.0kb upstream 2.0kb upstream 2000 false scaffold01233: 221487-223486 Cucumis sativus
Cucsa.179860 2.0kb downstream 2.0kb downstream 5548 true scaffold01233: 223487-229034 Cucumis sativus
Cucsa.179860 2.0kb downstream 2.0kb downstream 2000 false scaffold01233: 227035-229034 Cucumis sativus
Cucsa.179860 5.0kb upstream 5.0kb upstream 8548 true scaffold01233: 218487-227034 Cucumis sativus
Cucsa.179860 5.0kb upstream 5.0kb upstream 5000 false scaffold01233: 218487-223486 Cucumis sativus
Cucsa.179860 5.0kb downstream 5.0kb downstream 8548 true scaffold01233: 223487-232034 Cucumis sativus
Cucsa.179860 5.0kb downstream 5.0kb downstream 5000 false scaffold01233: 227035-232034 Cucumis sativus
Cucsa.179860 10.0kb upstream 10.0kb upstream 13548 true scaffold01233: 213487-227034 Cucumis sativus
Cucsa.179860 10.0kb upstream 10.0kb upstream 10000 false scaffold01233: 213487-223486 Cucumis sativus
Cucsa.179860 10.0kb downstream 10.0kb downstream 13548 true scaffold01233: 223487-237034 Cucumis sativus
Cucsa.179860 10.0kb downstream 10.0kb downstream 10000 false scaffold01233: 227035-237034 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
122312069 5265 Fabidae View MSA
124069921 5270 Rosid View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain