Gene : Cucsa.180170 C. sativus v1.0
Defline:  (1 of 1) PTHR10209:SF226 - 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN Genomic Order:  53
Name:  ? Cucsa.180170 Secondary Identifier:  ? PAC:16967303
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5125 Cucumis sativus pathologic  
Csativus PWY-641 Cucumis sativus pathologic  
Csativus PWY-7267 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.180170 0.5kb upstream 0.5kb upstream 4692 true scaffold01233: 486299-490990 Cucumis sativus
Cucsa.180170 0.5kb upstream 0.5kb upstream 500 false scaffold01233: 486299-486798 Cucumis sativus
Cucsa.180170 0.5kb downstream 0.5kb downstream 4692 true scaffold01233: 486799-491490 Cucumis sativus
Cucsa.180170 0.5kb downstream 0.5kb downstream 500 false scaffold01233: 490991-491490 Cucumis sativus
Cucsa.180170 1.0kb upstream 1.0kb upstream 5192 true scaffold01233: 485799-490990 Cucumis sativus
Cucsa.180170 1.0kb upstream 1.0kb upstream 1000 false scaffold01233: 485799-486798 Cucumis sativus
Cucsa.180170 1.0kb downstream 1.0kb downstream 5192 true scaffold01233: 486799-491990 Cucumis sativus
Cucsa.180170 1.0kb downstream 1.0kb downstream 1000 false scaffold01233: 490991-491990 Cucumis sativus
Cucsa.180170 2.0kb upstream 2.0kb upstream 6192 true scaffold01233: 484799-490990 Cucumis sativus
Cucsa.180170 2.0kb upstream 2.0kb upstream 2000 false scaffold01233: 484799-486798 Cucumis sativus
Cucsa.180170 2.0kb downstream 2.0kb downstream 6192 true scaffold01233: 486799-492990 Cucumis sativus
Cucsa.180170 2.0kb downstream 2.0kb downstream 2000 false scaffold01233: 490991-492990 Cucumis sativus
Cucsa.180170 5.0kb upstream 5.0kb upstream 9192 true scaffold01233: 481799-490990 Cucumis sativus
Cucsa.180170 5.0kb upstream 5.0kb upstream 5000 false scaffold01233: 481799-486798 Cucumis sativus
Cucsa.180170 5.0kb downstream 5.0kb downstream 9192 true scaffold01233: 486799-495990 Cucumis sativus
Cucsa.180170 5.0kb downstream 5.0kb downstream 5000 false scaffold01233: 490991-495990 Cucumis sativus
Cucsa.180170 10.0kb upstream 10.0kb upstream 14192 true scaffold01233: 476799-490990 Cucumis sativus
Cucsa.180170 10.0kb upstream 10.0kb upstream 10000 false scaffold01233: 476799-486798 Cucumis sativus
Cucsa.180170 10.0kb downstream 10.0kb downstream 14192 true scaffold01233: 486799-500990 Cucumis sativus
Cucsa.180170 10.0kb downstream 10.0kb downstream 10000 false scaffold01233: 490991-500990 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026742 5273 Angiosperm View MSA
122303051 5265 Fabidae View MSA
124062764 5270 Rosid View MSA
123736643 5271 Pentapetalae View MSA
122786747 5272 Eudicot View MSA
121347125 5274 Embryophyte View MSA
123380497 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain