Gene : Cucsa.191680 C. sativus v1.0
Defline:  (1 of 2) PTHR11177//PTHR11177:SF220 - CHITINASE Genomic Order:  8
Name:  ? Cucsa.191680 Secondary Identifier:  ? PAC:16967915
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.191680 0.5kb upstream 0.5kb upstream 1192 true scaffold01330: 63064-64255 Cucumis sativus
Cucsa.191680 0.5kb upstream 0.5kb upstream 500 false scaffold01330: 63756-64255 Cucumis sativus
Cucsa.191680 0.5kb downstream 0.5kb downstream 1192 true scaffold01330: 62564-63755 Cucumis sativus
Cucsa.191680 0.5kb downstream 0.5kb downstream 500 false scaffold01330: 62564-63063 Cucumis sativus
Cucsa.191680 1.0kb upstream 1.0kb upstream 1692 true scaffold01330: 63064-64755 Cucumis sativus
Cucsa.191680 1.0kb upstream 1.0kb upstream 1000 false scaffold01330: 63756-64755 Cucumis sativus
Cucsa.191680 1.0kb downstream 1.0kb downstream 1692 true scaffold01330: 62064-63755 Cucumis sativus
Cucsa.191680 1.0kb downstream 1.0kb downstream 1000 false scaffold01330: 62064-63063 Cucumis sativus
Cucsa.191680 2.0kb upstream 2.0kb upstream 2692 true scaffold01330: 63064-65755 Cucumis sativus
Cucsa.191680 2.0kb upstream 2.0kb upstream 2000 false scaffold01330: 63756-65755 Cucumis sativus
Cucsa.191680 2.0kb downstream 2.0kb downstream 2692 true scaffold01330: 61064-63755 Cucumis sativus
Cucsa.191680 2.0kb downstream 2.0kb downstream 2000 false scaffold01330: 61064-63063 Cucumis sativus
Cucsa.191680 5.0kb upstream 5.0kb upstream 3549 true scaffold01330: 63064-66612 Cucumis sativus
Cucsa.191680 5.0kb upstream 5.0kb upstream 2857 false scaffold01330: 63756-66612 Cucumis sativus
Cucsa.191680 5.0kb downstream 5.0kb downstream 5692 true scaffold01330: 58064-63755 Cucumis sativus
Cucsa.191680 5.0kb downstream 5.0kb downstream 5000 false scaffold01330: 58064-63063 Cucumis sativus
Cucsa.191680 10.0kb upstream 10.0kb upstream 3549 true scaffold01330: 63064-66612 Cucumis sativus
Cucsa.191680 10.0kb upstream 10.0kb upstream 2857 false scaffold01330: 63756-66612 Cucumis sativus
Cucsa.191680 10.0kb downstream 10.0kb downstream 10692 true scaffold01330: 53064-63755 Cucumis sativus
Cucsa.191680 10.0kb downstream 10.0kb downstream 10000 false scaffold01330: 53064-63063 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121603897 5273 Angiosperm Singleton cluster - no MSA
122234148 5265 Fabidae Singleton cluster - no MSA
123980372 5270 Rosid Singleton cluster - no MSA
123556049 5271 Pentapetalae Singleton cluster - no MSA
122590863 5272 Eudicot Singleton cluster - no MSA
120876187 5274 Embryophyte Singleton cluster - no MSA
122917078 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain