Gene : Cucsa.198870 C. sativus v1.0
Defline:  (1 of 1) PTHR11361:SF35 - DNA MISMATCH REPAIR PROTEIN MSH2 Genomic Order:  266
Name:  ? Cucsa.198870 Secondary Identifier:  ? PAC:16968643
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.198870 0.5kb upstream 0.5kb upstream 7421 true scaffold01357: 1772790-1780210 Cucumis sativus
Cucsa.198870 0.5kb upstream 0.5kb upstream 500 false scaffold01357: 1772790-1773289 Cucumis sativus
Cucsa.198870 0.5kb downstream 0.5kb downstream 7421 true scaffold01357: 1773290-1780710 Cucumis sativus
Cucsa.198870 0.5kb downstream 0.5kb downstream 500 false scaffold01357: 1780211-1780710 Cucumis sativus
Cucsa.198870 1.0kb upstream 1.0kb upstream 7921 true scaffold01357: 1772290-1780210 Cucumis sativus
Cucsa.198870 1.0kb upstream 1.0kb upstream 1000 false scaffold01357: 1772290-1773289 Cucumis sativus
Cucsa.198870 1.0kb downstream 1.0kb downstream 7921 true scaffold01357: 1773290-1781210 Cucumis sativus
Cucsa.198870 1.0kb downstream 1.0kb downstream 1000 false scaffold01357: 1780211-1781210 Cucumis sativus
Cucsa.198870 2.0kb upstream 2.0kb upstream 8921 true scaffold01357: 1771290-1780210 Cucumis sativus
Cucsa.198870 2.0kb upstream 2.0kb upstream 2000 false scaffold01357: 1771290-1773289 Cucumis sativus
Cucsa.198870 2.0kb downstream 2.0kb downstream 8921 true scaffold01357: 1773290-1782210 Cucumis sativus
Cucsa.198870 2.0kb downstream 2.0kb downstream 2000 false scaffold01357: 1780211-1782210 Cucumis sativus
Cucsa.198870 5.0kb upstream 5.0kb upstream 11921 true scaffold01357: 1768290-1780210 Cucumis sativus
Cucsa.198870 5.0kb upstream 5.0kb upstream 5000 false scaffold01357: 1768290-1773289 Cucumis sativus
Cucsa.198870 5.0kb downstream 5.0kb downstream 11921 true scaffold01357: 1773290-1785210 Cucumis sativus
Cucsa.198870 5.0kb downstream 5.0kb downstream 5000 false scaffold01357: 1780211-1785210 Cucumis sativus
Cucsa.198870 10.0kb upstream 10.0kb upstream 16921 true scaffold01357: 1763290-1780210 Cucumis sativus
Cucsa.198870 10.0kb upstream 10.0kb upstream 10000 false scaffold01357: 1763290-1773289 Cucumis sativus
Cucsa.198870 10.0kb downstream 10.0kb downstream 16921 true scaffold01357: 1773290-1790210 Cucumis sativus
Cucsa.198870 10.0kb downstream 10.0kb downstream 10000 false scaffold01357: 1780211-1790210 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303400 5265 Fabidae View MSA
124060647 5270 Rosid View MSA
123740546 5271 Pentapetalae View MSA
122786206 5272 Eudicot View MSA
122042672 5273 Angiosperm View MSA
121343804 5274 Embryophyte View MSA
123423885 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain