Gene : Cucsa.200230 C. sativus v1.0
Defline:  (1 of 2) PTHR12616 - VACUOLAR PROTEIN SORTING VPS41 Genomic Order:  52
Name:  ? Cucsa.200230 Secondary Identifier:  ? PAC:16968763
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.200230 0.5kb upstream 0.5kb upstream 18491 true scaffold01365: 637364-655854 Cucumis sativus
Cucsa.200230 0.5kb upstream 0.5kb upstream 500 false scaffold01365: 655355-655854 Cucumis sativus
Cucsa.200230 0.5kb downstream 0.5kb downstream 18491 true scaffold01365: 636864-655354 Cucumis sativus
Cucsa.200230 0.5kb downstream 0.5kb downstream 500 false scaffold01365: 636864-637363 Cucumis sativus
Cucsa.200230 1.0kb upstream 1.0kb upstream 18991 true scaffold01365: 637364-656354 Cucumis sativus
Cucsa.200230 1.0kb upstream 1.0kb upstream 1000 false scaffold01365: 655355-656354 Cucumis sativus
Cucsa.200230 1.0kb downstream 1.0kb downstream 18991 true scaffold01365: 636364-655354 Cucumis sativus
Cucsa.200230 1.0kb downstream 1.0kb downstream 1000 false scaffold01365: 636364-637363 Cucumis sativus
Cucsa.200230 2.0kb upstream 2.0kb upstream 19991 true scaffold01365: 637364-657354 Cucumis sativus
Cucsa.200230 2.0kb upstream 2.0kb upstream 2000 false scaffold01365: 655355-657354 Cucumis sativus
Cucsa.200230 2.0kb downstream 2.0kb downstream 19991 true scaffold01365: 635364-655354 Cucumis sativus
Cucsa.200230 2.0kb downstream 2.0kb downstream 2000 false scaffold01365: 635364-637363 Cucumis sativus
Cucsa.200230 5.0kb upstream 5.0kb upstream 22991 true scaffold01365: 637364-660354 Cucumis sativus
Cucsa.200230 5.0kb upstream 5.0kb upstream 5000 false scaffold01365: 655355-660354 Cucumis sativus
Cucsa.200230 5.0kb downstream 5.0kb downstream 22991 true scaffold01365: 632364-655354 Cucumis sativus
Cucsa.200230 5.0kb downstream 5.0kb downstream 5000 false scaffold01365: 632364-637363 Cucumis sativus
Cucsa.200230 10.0kb upstream 10.0kb upstream 27991 true scaffold01365: 637364-665354 Cucumis sativus
Cucsa.200230 10.0kb upstream 10.0kb upstream 10000 false scaffold01365: 655355-665354 Cucumis sativus
Cucsa.200230 10.0kb downstream 10.0kb downstream 27991 true scaffold01365: 627364-655354 Cucumis sativus
Cucsa.200230 10.0kb downstream 10.0kb downstream 10000 false scaffold01365: 627364-637363 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304932 5265 Fabidae View MSA
124066764 5270 Rosid View MSA
123748111 5271 Pentapetalae View MSA
122793294 5272 Eudicot View MSA
122046390 5273 Angiosperm View MSA
121347260 5274 Embryophyte View MSA
123424469 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain