Gene : Cucsa.212500 C. sativus v1.0
Defline:  (1 of 1) PTHR33596:SF3 - COLD-REGULATED 413 INNER MEMBRANE PROTEIN 1, CHLOROPLASTIC-RELATED Genomic Order:  32
Name:  ? Cucsa.212500 Secondary Identifier:  ? PAC:16969350
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.212500 0.5kb upstream 0.5kb upstream 2668 true scaffold01543: 294789-297456 Cucumis sativus
Cucsa.212500 0.5kb upstream 0.5kb upstream 500 false scaffold01543: 296957-297456 Cucumis sativus
Cucsa.212500 0.5kb downstream 0.5kb downstream 2668 true scaffold01543: 294289-296956 Cucumis sativus
Cucsa.212500 0.5kb downstream 0.5kb downstream 500 false scaffold01543: 294289-294788 Cucumis sativus
Cucsa.212500 1.0kb upstream 1.0kb upstream 3168 true scaffold01543: 294789-297956 Cucumis sativus
Cucsa.212500 1.0kb upstream 1.0kb upstream 1000 false scaffold01543: 296957-297956 Cucumis sativus
Cucsa.212500 1.0kb downstream 1.0kb downstream 3168 true scaffold01543: 293789-296956 Cucumis sativus
Cucsa.212500 1.0kb downstream 1.0kb downstream 1000 false scaffold01543: 293789-294788 Cucumis sativus
Cucsa.212500 2.0kb upstream 2.0kb upstream 4168 true scaffold01543: 294789-298956 Cucumis sativus
Cucsa.212500 2.0kb upstream 2.0kb upstream 2000 false scaffold01543: 296957-298956 Cucumis sativus
Cucsa.212500 2.0kb downstream 2.0kb downstream 4168 true scaffold01543: 292789-296956 Cucumis sativus
Cucsa.212500 2.0kb downstream 2.0kb downstream 2000 false scaffold01543: 292789-294788 Cucumis sativus
Cucsa.212500 5.0kb upstream 5.0kb upstream 7168 true scaffold01543: 294789-301956 Cucumis sativus
Cucsa.212500 5.0kb upstream 5.0kb upstream 5000 false scaffold01543: 296957-301956 Cucumis sativus
Cucsa.212500 5.0kb downstream 5.0kb downstream 7168 true scaffold01543: 289789-296956 Cucumis sativus
Cucsa.212500 5.0kb downstream 5.0kb downstream 5000 false scaffold01543: 289789-294788 Cucumis sativus
Cucsa.212500 10.0kb upstream 10.0kb upstream 12168 true scaffold01543: 294789-306956 Cucumis sativus
Cucsa.212500 10.0kb upstream 10.0kb upstream 10000 false scaffold01543: 296957-306956 Cucumis sativus
Cucsa.212500 10.0kb downstream 10.0kb downstream 12168 true scaffold01543: 284789-296956 Cucumis sativus
Cucsa.212500 10.0kb downstream 10.0kb downstream 10000 false scaffold01543: 284789-294788 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026496 5273 Angiosperm View MSA
122303130 5265 Fabidae View MSA
124068573 5270 Rosid View MSA
123739751 5271 Pentapetalae View MSA
122786208 5272 Eudicot View MSA
121350668 5274 Embryophyte View MSA
123381843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain