Gene : Cucsa.226900 C. sativus v1.0
Defline:  (1 of 2) 6.1.1.4 - Leucine--tRNA ligase / Leucyl-tRNA synthetase Genomic Order:  4
Name:  ? Cucsa.226900 Secondary Identifier:  ? PAC:16969993
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRNA-CHARGING-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.226900 0.5kb upstream 0.5kb upstream 6805 true scaffold01910: 42108-48912 Cucumis sativus
Cucsa.226900 0.5kb upstream 0.5kb upstream 500 false scaffold01910: 48413-48912 Cucumis sativus
Cucsa.226900 0.5kb downstream 0.5kb downstream 6805 true scaffold01910: 41608-48412 Cucumis sativus
Cucsa.226900 0.5kb downstream 0.5kb downstream 500 false scaffold01910: 41608-42107 Cucumis sativus
Cucsa.226900 1.0kb upstream 1.0kb upstream 7305 true scaffold01910: 42108-49412 Cucumis sativus
Cucsa.226900 1.0kb upstream 1.0kb upstream 1000 false scaffold01910: 48413-49412 Cucumis sativus
Cucsa.226900 1.0kb downstream 1.0kb downstream 7305 true scaffold01910: 41108-48412 Cucumis sativus
Cucsa.226900 1.0kb downstream 1.0kb downstream 1000 false scaffold01910: 41108-42107 Cucumis sativus
Cucsa.226900 2.0kb upstream 2.0kb upstream 8305 true scaffold01910: 42108-50412 Cucumis sativus
Cucsa.226900 2.0kb upstream 2.0kb upstream 2000 false scaffold01910: 48413-50412 Cucumis sativus
Cucsa.226900 2.0kb downstream 2.0kb downstream 8305 true scaffold01910: 40108-48412 Cucumis sativus
Cucsa.226900 2.0kb downstream 2.0kb downstream 2000 false scaffold01910: 40108-42107 Cucumis sativus
Cucsa.226900 5.0kb upstream 5.0kb upstream 11305 true scaffold01910: 42108-53412 Cucumis sativus
Cucsa.226900 5.0kb upstream 5.0kb upstream 5000 false scaffold01910: 48413-53412 Cucumis sativus
Cucsa.226900 5.0kb downstream 5.0kb downstream 11305 true scaffold01910: 37108-48412 Cucumis sativus
Cucsa.226900 5.0kb downstream 5.0kb downstream 5000 false scaffold01910: 37108-42107 Cucumis sativus
Cucsa.226900 10.0kb upstream 10.0kb upstream 16305 true scaffold01910: 42108-58412 Cucumis sativus
Cucsa.226900 10.0kb upstream 10.0kb upstream 10000 false scaffold01910: 48413-58412 Cucumis sativus
Cucsa.226900 10.0kb downstream 10.0kb downstream 16305 true scaffold01910: 32108-48412 Cucumis sativus
Cucsa.226900 10.0kb downstream 10.0kb downstream 10000 false scaffold01910: 32108-42107 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304884 5265 Fabidae View MSA
124066090 5270 Rosid View MSA
123749882 5271 Pentapetalae View MSA
122789988 5272 Eudicot View MSA
122047618 5273 Angiosperm View MSA
121344832 5274 Embryophyte View MSA
123424388 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain