Gene : Cucsa.257530 C. sativus v1.0
Defline:  (1 of 1) PTHR11735:SF12 - TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE, MITOCHONDRIAL-RELATED Genomic Order:  666
Name:  ? Cucsa.257530 Secondary Identifier:  ? PAC:16972721
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY0-1587 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.257530 0.5kb upstream 0.5kb upstream 5129 true scaffold02229: 4790100-4795228 Cucumis sativus
Cucsa.257530 0.5kb upstream 0.5kb upstream 500 false scaffold02229: 4790100-4790599 Cucumis sativus
Cucsa.257530 0.5kb downstream 0.5kb downstream 5129 true scaffold02229: 4790600-4795728 Cucumis sativus
Cucsa.257530 0.5kb downstream 0.5kb downstream 500 false scaffold02229: 4795229-4795728 Cucumis sativus
Cucsa.257530 1.0kb upstream 1.0kb upstream 5629 true scaffold02229: 4789600-4795228 Cucumis sativus
Cucsa.257530 1.0kb upstream 1.0kb upstream 1000 false scaffold02229: 4789600-4790599 Cucumis sativus
Cucsa.257530 1.0kb downstream 1.0kb downstream 5629 true scaffold02229: 4790600-4796228 Cucumis sativus
Cucsa.257530 1.0kb downstream 1.0kb downstream 1000 false scaffold02229: 4795229-4796228 Cucumis sativus
Cucsa.257530 2.0kb upstream 2.0kb upstream 6629 true scaffold02229: 4788600-4795228 Cucumis sativus
Cucsa.257530 2.0kb upstream 2.0kb upstream 2000 false scaffold02229: 4788600-4790599 Cucumis sativus
Cucsa.257530 2.0kb downstream 2.0kb downstream 6629 true scaffold02229: 4790600-4797228 Cucumis sativus
Cucsa.257530 2.0kb downstream 2.0kb downstream 2000 false scaffold02229: 4795229-4797228 Cucumis sativus
Cucsa.257530 5.0kb upstream 5.0kb upstream 9629 true scaffold02229: 4785600-4795228 Cucumis sativus
Cucsa.257530 5.0kb upstream 5.0kb upstream 5000 false scaffold02229: 4785600-4790599 Cucumis sativus
Cucsa.257530 5.0kb downstream 5.0kb downstream 9629 true scaffold02229: 4790600-4800228 Cucumis sativus
Cucsa.257530 5.0kb downstream 5.0kb downstream 5000 false scaffold02229: 4795229-4800228 Cucumis sativus
Cucsa.257530 10.0kb upstream 10.0kb upstream 14629 true scaffold02229: 4780600-4795228 Cucumis sativus
Cucsa.257530 10.0kb upstream 10.0kb upstream 10000 false scaffold02229: 4780600-4790599 Cucumis sativus
Cucsa.257530 10.0kb downstream 10.0kb downstream 14629 true scaffold02229: 4790600-4805228 Cucumis sativus
Cucsa.257530 10.0kb downstream 10.0kb downstream 10000 false scaffold02229: 4795229-4805228 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298994 5265 Fabidae View MSA
124066071 5270 Rosid View MSA
123747951 5271 Pentapetalae View MSA
122791458 5272 Eudicot View MSA
122043416 5273 Angiosperm View MSA
121345797 5274 Embryophyte View MSA
123425080 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain