Gene : Cucsa.273090 C. sativus v1.0
Defline:  (1 of 1) PTHR11468:SF8 - ALPHA-GLUCAN PHOSPHORYLASE 1 Genomic Order:  10
Name:  ? Cucsa.273090 Secondary Identifier:  ? PAC:16973769
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7238 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.273090 0.5kb upstream 0.5kb upstream 7558 true scaffold02511: 81268-88825 Cucumis sativus
Cucsa.273090 0.5kb upstream 0.5kb upstream 500 false scaffold02511: 88326-88825 Cucumis sativus
Cucsa.273090 0.5kb downstream 0.5kb downstream 7558 true scaffold02511: 80768-88325 Cucumis sativus
Cucsa.273090 0.5kb downstream 0.5kb downstream 500 false scaffold02511: 80768-81267 Cucumis sativus
Cucsa.273090 1.0kb upstream 1.0kb upstream 8058 true scaffold02511: 81268-89325 Cucumis sativus
Cucsa.273090 1.0kb upstream 1.0kb upstream 1000 false scaffold02511: 88326-89325 Cucumis sativus
Cucsa.273090 1.0kb downstream 1.0kb downstream 8058 true scaffold02511: 80268-88325 Cucumis sativus
Cucsa.273090 1.0kb downstream 1.0kb downstream 1000 false scaffold02511: 80268-81267 Cucumis sativus
Cucsa.273090 2.0kb upstream 2.0kb upstream 9058 true scaffold02511: 81268-90325 Cucumis sativus
Cucsa.273090 2.0kb upstream 2.0kb upstream 2000 false scaffold02511: 88326-90325 Cucumis sativus
Cucsa.273090 2.0kb downstream 2.0kb downstream 9058 true scaffold02511: 79268-88325 Cucumis sativus
Cucsa.273090 2.0kb downstream 2.0kb downstream 2000 false scaffold02511: 79268-81267 Cucumis sativus
Cucsa.273090 5.0kb upstream 5.0kb upstream 12058 true scaffold02511: 81268-93325 Cucumis sativus
Cucsa.273090 5.0kb upstream 5.0kb upstream 5000 false scaffold02511: 88326-93325 Cucumis sativus
Cucsa.273090 5.0kb downstream 5.0kb downstream 12058 true scaffold02511: 76268-88325 Cucumis sativus
Cucsa.273090 5.0kb downstream 5.0kb downstream 5000 false scaffold02511: 76268-81267 Cucumis sativus
Cucsa.273090 10.0kb upstream 10.0kb upstream 17058 true scaffold02511: 81268-98325 Cucumis sativus
Cucsa.273090 10.0kb upstream 10.0kb upstream 10000 false scaffold02511: 88326-98325 Cucumis sativus
Cucsa.273090 10.0kb downstream 10.0kb downstream 17058 true scaffold02511: 71268-88325 Cucumis sativus
Cucsa.273090 10.0kb downstream 10.0kb downstream 10000 false scaffold02511: 71268-81267 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299436 5265 Fabidae View MSA
124071447 5270 Rosid View MSA
123744201 5271 Pentapetalae View MSA
122788131 5272 Eudicot View MSA
122045780 5273 Angiosperm View MSA
121351120 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain