Gene : Cucsa.278560 C. sativus v1.0
Defline:  (1 of 4) 1.1.1.40 - Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) / Pyruvic-malic carboxylase Genomic Order:  11
Name:  ? Cucsa.278560 Secondary Identifier:  ? PAC:16974155
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus GLUCONEO-PWY Cucumis sativus pathologic  
Csativus PWY-241 Cucumis sativus pathologic  
Csativus PWY-7117 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.278560 0.5kb upstream 0.5kb upstream 5658 true scaffold02615: 133315-138972 Cucumis sativus
Cucsa.278560 0.5kb upstream 0.5kb upstream 500 false scaffold02615: 138473-138972 Cucumis sativus
Cucsa.278560 0.5kb downstream 0.5kb downstream 5658 true scaffold02615: 132815-138472 Cucumis sativus
Cucsa.278560 0.5kb downstream 0.5kb downstream 500 false scaffold02615: 132815-133314 Cucumis sativus
Cucsa.278560 1.0kb upstream 1.0kb upstream 6158 true scaffold02615: 133315-139472 Cucumis sativus
Cucsa.278560 1.0kb upstream 1.0kb upstream 1000 false scaffold02615: 138473-139472 Cucumis sativus
Cucsa.278560 1.0kb downstream 1.0kb downstream 6158 true scaffold02615: 132315-138472 Cucumis sativus
Cucsa.278560 1.0kb downstream 1.0kb downstream 1000 false scaffold02615: 132315-133314 Cucumis sativus
Cucsa.278560 2.0kb upstream 2.0kb upstream 7158 true scaffold02615: 133315-140472 Cucumis sativus
Cucsa.278560 2.0kb upstream 2.0kb upstream 2000 false scaffold02615: 138473-140472 Cucumis sativus
Cucsa.278560 2.0kb downstream 2.0kb downstream 7158 true scaffold02615: 131315-138472 Cucumis sativus
Cucsa.278560 2.0kb downstream 2.0kb downstream 2000 false scaffold02615: 131315-133314 Cucumis sativus
Cucsa.278560 5.0kb upstream 5.0kb upstream 10158 true scaffold02615: 133315-143472 Cucumis sativus
Cucsa.278560 5.0kb upstream 5.0kb upstream 5000 false scaffold02615: 138473-143472 Cucumis sativus
Cucsa.278560 5.0kb downstream 5.0kb downstream 10158 true scaffold02615: 128315-138472 Cucumis sativus
Cucsa.278560 5.0kb downstream 5.0kb downstream 5000 false scaffold02615: 128315-133314 Cucumis sativus
Cucsa.278560 10.0kb upstream 10.0kb upstream 15158 true scaffold02615: 133315-148472 Cucumis sativus
Cucsa.278560 10.0kb upstream 10.0kb upstream 10000 false scaffold02615: 138473-148472 Cucumis sativus
Cucsa.278560 10.0kb downstream 10.0kb downstream 15158 true scaffold02615: 123315-138472 Cucumis sativus
Cucsa.278560 10.0kb downstream 10.0kb downstream 10000 false scaffold02615: 123315-133314 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301103 5265 Fabidae View MSA
124068705 5270 Rosid View MSA
123751350 5271 Pentapetalae View MSA
122794130 5272 Eudicot View MSA
122042224 5273 Angiosperm View MSA
121345569 5274 Embryophyte View MSA
123428715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain