Gene : Cucsa.283140 C. sativus v1.0
Defline:  (1 of 2) PTHR15184:SF45 - ATP SYNTHASE SUBUNIT BETA-1, MITOCHONDRIAL-RELATED Genomic Order:  61
Name:  ? Cucsa.283140 Secondary Identifier:  ? PAC:16974492
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7219 Cucumis sativus pathologic  
Csativus PWY-7229 Cucumis sativus pathologic  
Csativus PWY-841 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.283140 0.5kb upstream 0.5kb upstream 4320 true scaffold02653: 354299-358618 Cucumis sativus
Cucsa.283140 0.5kb upstream 0.5kb upstream 500 false scaffold02653: 358119-358618 Cucumis sativus
Cucsa.283140 0.5kb downstream 0.5kb downstream 4320 true scaffold02653: 353799-358118 Cucumis sativus
Cucsa.283140 0.5kb downstream 0.5kb downstream 500 false scaffold02653: 353799-354298 Cucumis sativus
Cucsa.283140 1.0kb upstream 1.0kb upstream 4820 true scaffold02653: 354299-359118 Cucumis sativus
Cucsa.283140 1.0kb upstream 1.0kb upstream 1000 false scaffold02653: 358119-359118 Cucumis sativus
Cucsa.283140 1.0kb downstream 1.0kb downstream 4820 true scaffold02653: 353299-358118 Cucumis sativus
Cucsa.283140 1.0kb downstream 1.0kb downstream 1000 false scaffold02653: 353299-354298 Cucumis sativus
Cucsa.283140 2.0kb upstream 2.0kb upstream 5820 true scaffold02653: 354299-360118 Cucumis sativus
Cucsa.283140 2.0kb upstream 2.0kb upstream 2000 false scaffold02653: 358119-360118 Cucumis sativus
Cucsa.283140 2.0kb downstream 2.0kb downstream 5820 true scaffold02653: 352299-358118 Cucumis sativus
Cucsa.283140 2.0kb downstream 2.0kb downstream 2000 false scaffold02653: 352299-354298 Cucumis sativus
Cucsa.283140 5.0kb upstream 5.0kb upstream 8820 true scaffold02653: 354299-363118 Cucumis sativus
Cucsa.283140 5.0kb upstream 5.0kb upstream 5000 false scaffold02653: 358119-363118 Cucumis sativus
Cucsa.283140 5.0kb downstream 5.0kb downstream 8820 true scaffold02653: 349299-358118 Cucumis sativus
Cucsa.283140 5.0kb downstream 5.0kb downstream 5000 false scaffold02653: 349299-354298 Cucumis sativus
Cucsa.283140 10.0kb upstream 10.0kb upstream 13820 true scaffold02653: 354299-368118 Cucumis sativus
Cucsa.283140 10.0kb upstream 10.0kb upstream 10000 false scaffold02653: 358119-368118 Cucumis sativus
Cucsa.283140 10.0kb downstream 10.0kb downstream 13820 true scaffold02653: 344299-358118 Cucumis sativus
Cucsa.283140 10.0kb downstream 10.0kb downstream 10000 false scaffold02653: 344299-354298 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300766 5265 Fabidae View MSA
124072402 5270 Rosid View MSA
123749962 5271 Pentapetalae View MSA
122797810 5272 Eudicot View MSA
122051511 5273 Angiosperm View MSA
121351676 5274 Embryophyte View MSA
123424920 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain