Gene : Cucsa.301880 C. sativus v1.0
Defline:  (1 of 1) PTHR10969:SF39 - AUTOPHAGY-RELATED PROTEIN 8F Genomic Order:  19
Name:  ? Cucsa.301880 Secondary Identifier:  ? PAC:16975673
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.301880 0.5kb upstream 0.5kb upstream 3348 true scaffold02951: 118167-121514 Cucumis sativus
Cucsa.301880 0.5kb upstream 0.5kb upstream 500 false scaffold02951: 118167-118666 Cucumis sativus
Cucsa.301880 0.5kb downstream 0.5kb downstream 3348 true scaffold02951: 118667-122014 Cucumis sativus
Cucsa.301880 0.5kb downstream 0.5kb downstream 500 false scaffold02951: 121515-122014 Cucumis sativus
Cucsa.301880 1.0kb upstream 1.0kb upstream 3848 true scaffold02951: 117667-121514 Cucumis sativus
Cucsa.301880 1.0kb upstream 1.0kb upstream 1000 false scaffold02951: 117667-118666 Cucumis sativus
Cucsa.301880 1.0kb downstream 1.0kb downstream 3848 true scaffold02951: 118667-122514 Cucumis sativus
Cucsa.301880 1.0kb downstream 1.0kb downstream 1000 false scaffold02951: 121515-122514 Cucumis sativus
Cucsa.301880 2.0kb upstream 2.0kb upstream 4848 true scaffold02951: 116667-121514 Cucumis sativus
Cucsa.301880 2.0kb upstream 2.0kb upstream 2000 false scaffold02951: 116667-118666 Cucumis sativus
Cucsa.301880 2.0kb downstream 2.0kb downstream 4848 true scaffold02951: 118667-123514 Cucumis sativus
Cucsa.301880 2.0kb downstream 2.0kb downstream 2000 false scaffold02951: 121515-123514 Cucumis sativus
Cucsa.301880 5.0kb upstream 5.0kb upstream 7848 true scaffold02951: 113667-121514 Cucumis sativus
Cucsa.301880 5.0kb upstream 5.0kb upstream 5000 false scaffold02951: 113667-118666 Cucumis sativus
Cucsa.301880 5.0kb downstream 5.0kb downstream 7848 true scaffold02951: 118667-126514 Cucumis sativus
Cucsa.301880 5.0kb downstream 5.0kb downstream 5000 false scaffold02951: 121515-126514 Cucumis sativus
Cucsa.301880 10.0kb upstream 10.0kb upstream 12848 true scaffold02951: 108667-121514 Cucumis sativus
Cucsa.301880 10.0kb upstream 10.0kb upstream 10000 false scaffold02951: 108667-118666 Cucumis sativus
Cucsa.301880 10.0kb downstream 10.0kb downstream 12848 true scaffold02951: 118667-131514 Cucumis sativus
Cucsa.301880 10.0kb downstream 10.0kb downstream 10000 false scaffold02951: 121515-131514 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121605141 5273 Angiosperm Singleton cluster - no MSA
122235404 5265 Fabidae Singleton cluster - no MSA
123981620 5270 Rosid Singleton cluster - no MSA
123557295 5271 Pentapetalae Singleton cluster - no MSA
122592109 5272 Eudicot Singleton cluster - no MSA
120877431 5274 Embryophyte Singleton cluster - no MSA
122918320 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain