Gene : Cucsa.310150 C. sativus v1.0
Defline:  (1 of 2) 6.1.1.16 - Cysteine--tRNA ligase / Cysteinyl-tRNA synthetase Genomic Order:  6
Name:  ? Cucsa.310150 Secondary Identifier:  ? PAC:16976483
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRNA-CHARGING-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.310150 0.5kb upstream 0.5kb upstream 5165 true scaffold02995: 23063-28227 Cucumis sativus
Cucsa.310150 0.5kb upstream 0.5kb upstream 500 false scaffold02995: 27728-28227 Cucumis sativus
Cucsa.310150 0.5kb downstream 0.5kb downstream 5165 true scaffold02995: 22563-27727 Cucumis sativus
Cucsa.310150 0.5kb downstream 0.5kb downstream 500 false scaffold02995: 22563-23062 Cucumis sativus
Cucsa.310150 1.0kb upstream 1.0kb upstream 5665 true scaffold02995: 23063-28727 Cucumis sativus
Cucsa.310150 1.0kb upstream 1.0kb upstream 1000 false scaffold02995: 27728-28727 Cucumis sativus
Cucsa.310150 1.0kb downstream 1.0kb downstream 5665 true scaffold02995: 22063-27727 Cucumis sativus
Cucsa.310150 1.0kb downstream 1.0kb downstream 1000 false scaffold02995: 22063-23062 Cucumis sativus
Cucsa.310150 2.0kb upstream 2.0kb upstream 6665 true scaffold02995: 23063-29727 Cucumis sativus
Cucsa.310150 2.0kb upstream 2.0kb upstream 2000 false scaffold02995: 27728-29727 Cucumis sativus
Cucsa.310150 2.0kb downstream 2.0kb downstream 6665 true scaffold02995: 21063-27727 Cucumis sativus
Cucsa.310150 2.0kb downstream 2.0kb downstream 2000 false scaffold02995: 21063-23062 Cucumis sativus
Cucsa.310150 5.0kb upstream 5.0kb upstream 9665 true scaffold02995: 23063-32727 Cucumis sativus
Cucsa.310150 5.0kb upstream 5.0kb upstream 5000 false scaffold02995: 27728-32727 Cucumis sativus
Cucsa.310150 5.0kb downstream 5.0kb downstream 9665 true scaffold02995: 18063-27727 Cucumis sativus
Cucsa.310150 5.0kb downstream 5.0kb downstream 5000 false scaffold02995: 18063-23062 Cucumis sativus
Cucsa.310150 10.0kb upstream 10.0kb upstream 14665 true scaffold02995: 23063-37727 Cucumis sativus
Cucsa.310150 10.0kb upstream 10.0kb upstream 10000 false scaffold02995: 27728-37727 Cucumis sativus
Cucsa.310150 10.0kb downstream 10.0kb downstream 14665 true scaffold02995: 13063-27727 Cucumis sativus
Cucsa.310150 10.0kb downstream 10.0kb downstream 10000 false scaffold02995: 13063-23062 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301988 5265 Fabidae View MSA
124064114 5270 Rosid View MSA
123740490 5271 Pentapetalae View MSA
122796525 5272 Eudicot View MSA
122050932 5273 Angiosperm View MSA
121350340 5274 Embryophyte View MSA
123427761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain