Gene : Cucsa.310870 C. sativus v1.0
Defline:  (1 of 1) 2.1.1.177 - 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase / rRNA large subunit methyltransferase H Genomic Order:  78
Name:  ? Cucsa.310870 Secondary Identifier:  ? PAC:16976595
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.310870 0.5kb upstream 0.5kb upstream 2965 true scaffold02995: 599507-602471 Cucumis sativus
Cucsa.310870 0.5kb upstream 0.5kb upstream 500 false scaffold02995: 601972-602471 Cucumis sativus
Cucsa.310870 0.5kb downstream 0.5kb downstream 2965 true scaffold02995: 599007-601971 Cucumis sativus
Cucsa.310870 0.5kb downstream 0.5kb downstream 500 false scaffold02995: 599007-599506 Cucumis sativus
Cucsa.310870 1.0kb upstream 1.0kb upstream 3465 true scaffold02995: 599507-602971 Cucumis sativus
Cucsa.310870 1.0kb upstream 1.0kb upstream 1000 false scaffold02995: 601972-602971 Cucumis sativus
Cucsa.310870 1.0kb downstream 1.0kb downstream 3465 true scaffold02995: 598507-601971 Cucumis sativus
Cucsa.310870 1.0kb downstream 1.0kb downstream 1000 false scaffold02995: 598507-599506 Cucumis sativus
Cucsa.310870 2.0kb upstream 2.0kb upstream 4465 true scaffold02995: 599507-603971 Cucumis sativus
Cucsa.310870 2.0kb upstream 2.0kb upstream 2000 false scaffold02995: 601972-603971 Cucumis sativus
Cucsa.310870 2.0kb downstream 2.0kb downstream 4465 true scaffold02995: 597507-601971 Cucumis sativus
Cucsa.310870 2.0kb downstream 2.0kb downstream 2000 false scaffold02995: 597507-599506 Cucumis sativus
Cucsa.310870 5.0kb upstream 5.0kb upstream 7465 true scaffold02995: 599507-606971 Cucumis sativus
Cucsa.310870 5.0kb upstream 5.0kb upstream 5000 false scaffold02995: 601972-606971 Cucumis sativus
Cucsa.310870 5.0kb downstream 5.0kb downstream 7465 true scaffold02995: 594507-601971 Cucumis sativus
Cucsa.310870 5.0kb downstream 5.0kb downstream 5000 false scaffold02995: 594507-599506 Cucumis sativus
Cucsa.310870 10.0kb upstream 10.0kb upstream 12465 true scaffold02995: 599507-611971 Cucumis sativus
Cucsa.310870 10.0kb upstream 10.0kb upstream 10000 false scaffold02995: 601972-611971 Cucumis sativus
Cucsa.310870 10.0kb downstream 10.0kb downstream 12465 true scaffold02995: 589507-601971 Cucumis sativus
Cucsa.310870 10.0kb downstream 10.0kb downstream 10000 false scaffold02995: 589507-599506 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041237 5273 Angiosperm View MSA
122300345 5265 Fabidae View MSA
124065291 5270 Rosid View MSA
123737666 5271 Pentapetalae View MSA
122786404 5272 Eudicot View MSA
121344768 5274 Embryophyte View MSA
123424832 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain