Gene : Cucsa.312680 C. sativus v1.0
Defline:  (1 of 1) PTHR23160:SF3 - SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED Genomic Order:  253
Name:  ? Cucsa.312680 Secondary Identifier:  ? PAC:16976893
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.312680 0.5kb upstream 0.5kb upstream 7484 true scaffold02995: 2014537-2022020 Cucumis sativus
Cucsa.312680 0.5kb upstream 0.5kb upstream 500 false scaffold02995: 2014537-2015036 Cucumis sativus
Cucsa.312680 0.5kb downstream 0.5kb downstream 7484 true scaffold02995: 2015037-2022520 Cucumis sativus
Cucsa.312680 0.5kb downstream 0.5kb downstream 500 false scaffold02995: 2022021-2022520 Cucumis sativus
Cucsa.312680 1.0kb upstream 1.0kb upstream 7984 true scaffold02995: 2014037-2022020 Cucumis sativus
Cucsa.312680 1.0kb upstream 1.0kb upstream 1000 false scaffold02995: 2014037-2015036 Cucumis sativus
Cucsa.312680 1.0kb downstream 1.0kb downstream 7984 true scaffold02995: 2015037-2023020 Cucumis sativus
Cucsa.312680 1.0kb downstream 1.0kb downstream 1000 false scaffold02995: 2022021-2023020 Cucumis sativus
Cucsa.312680 2.0kb upstream 2.0kb upstream 8984 true scaffold02995: 2013037-2022020 Cucumis sativus
Cucsa.312680 2.0kb upstream 2.0kb upstream 2000 false scaffold02995: 2013037-2015036 Cucumis sativus
Cucsa.312680 2.0kb downstream 2.0kb downstream 8984 true scaffold02995: 2015037-2024020 Cucumis sativus
Cucsa.312680 2.0kb downstream 2.0kb downstream 2000 false scaffold02995: 2022021-2024020 Cucumis sativus
Cucsa.312680 5.0kb upstream 5.0kb upstream 11984 true scaffold02995: 2010037-2022020 Cucumis sativus
Cucsa.312680 5.0kb upstream 5.0kb upstream 5000 false scaffold02995: 2010037-2015036 Cucumis sativus
Cucsa.312680 5.0kb downstream 5.0kb downstream 11984 true scaffold02995: 2015037-2027020 Cucumis sativus
Cucsa.312680 5.0kb downstream 5.0kb downstream 5000 false scaffold02995: 2022021-2027020 Cucumis sativus
Cucsa.312680 10.0kb upstream 10.0kb upstream 16984 true scaffold02995: 2005037-2022020 Cucumis sativus
Cucsa.312680 10.0kb upstream 10.0kb upstream 10000 false scaffold02995: 2005037-2015036 Cucumis sativus
Cucsa.312680 10.0kb downstream 10.0kb downstream 16984 true scaffold02995: 2015037-2032020 Cucumis sativus
Cucsa.312680 10.0kb downstream 10.0kb downstream 10000 false scaffold02995: 2022021-2032020 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302115 5265 Fabidae View MSA
124068908 5270 Rosid View MSA
123737284 5271 Pentapetalae View MSA
122789700 5272 Eudicot View MSA
122042808 5273 Angiosperm View MSA
121349481 5274 Embryophyte View MSA
123381327 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain