Gene : Cucsa.327900 C. sativus v1.0
Defline:  (1 of 1) PTHR33403:SF1 - PROTEIN SPIRAL1 Genomic Order:  30
Name:  ? Cucsa.327900 Secondary Identifier:  ? PAC:16978119
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.327900 0.5kb upstream 0.5kb upstream 2800 true scaffold03159: 203012-205811 Cucumis sativus
Cucsa.327900 0.5kb upstream 0.5kb upstream 500 false scaffold03159: 203012-203511 Cucumis sativus
Cucsa.327900 0.5kb downstream 0.5kb downstream 2800 true scaffold03159: 203512-206311 Cucumis sativus
Cucsa.327900 0.5kb downstream 0.5kb downstream 500 false scaffold03159: 205812-206311 Cucumis sativus
Cucsa.327900 1.0kb upstream 1.0kb upstream 3300 true scaffold03159: 202512-205811 Cucumis sativus
Cucsa.327900 1.0kb upstream 1.0kb upstream 1000 false scaffold03159: 202512-203511 Cucumis sativus
Cucsa.327900 1.0kb downstream 1.0kb downstream 3300 true scaffold03159: 203512-206811 Cucumis sativus
Cucsa.327900 1.0kb downstream 1.0kb downstream 1000 false scaffold03159: 205812-206811 Cucumis sativus
Cucsa.327900 2.0kb upstream 2.0kb upstream 4300 true scaffold03159: 201512-205811 Cucumis sativus
Cucsa.327900 2.0kb upstream 2.0kb upstream 2000 false scaffold03159: 201512-203511 Cucumis sativus
Cucsa.327900 2.0kb downstream 2.0kb downstream 4300 true scaffold03159: 203512-207811 Cucumis sativus
Cucsa.327900 2.0kb downstream 2.0kb downstream 2000 false scaffold03159: 205812-207811 Cucumis sativus
Cucsa.327900 5.0kb upstream 5.0kb upstream 7300 true scaffold03159: 198512-205811 Cucumis sativus
Cucsa.327900 5.0kb upstream 5.0kb upstream 5000 false scaffold03159: 198512-203511 Cucumis sativus
Cucsa.327900 5.0kb downstream 5.0kb downstream 7300 true scaffold03159: 203512-210811 Cucumis sativus
Cucsa.327900 5.0kb downstream 5.0kb downstream 5000 false scaffold03159: 205812-210811 Cucumis sativus
Cucsa.327900 10.0kb upstream 10.0kb upstream 12300 true scaffold03159: 193512-205811 Cucumis sativus
Cucsa.327900 10.0kb upstream 10.0kb upstream 10000 false scaffold03159: 193512-203511 Cucumis sativus
Cucsa.327900 10.0kb downstream 10.0kb downstream 12300 true scaffold03159: 203512-215811 Cucumis sativus
Cucsa.327900 10.0kb downstream 10.0kb downstream 10000 false scaffold03159: 205812-215811 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314267 5265 Fabidae View MSA
124060662 5270 Rosid View MSA
123749851 5271 Pentapetalae View MSA
122787340 5272 Eudicot View MSA
122045105 5273 Angiosperm View MSA
121351504 5274 Embryophyte View MSA
123425662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain