Gene : Cucsa.328170 C. sativus v1.0
Defline:  (1 of 8) PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  57
Name:  ? Cucsa.328170 Secondary Identifier:  ? PAC:16978169
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.328170 0.5kb upstream 0.5kb upstream 5329 true scaffold03159: 546289-551617 Cucumis sativus
Cucsa.328170 0.5kb upstream 0.5kb upstream 500 false scaffold03159: 551118-551617 Cucumis sativus
Cucsa.328170 0.5kb downstream 0.5kb downstream 5329 true scaffold03159: 545789-551117 Cucumis sativus
Cucsa.328170 0.5kb downstream 0.5kb downstream 500 false scaffold03159: 545789-546288 Cucumis sativus
Cucsa.328170 1.0kb upstream 1.0kb upstream 5829 true scaffold03159: 546289-552117 Cucumis sativus
Cucsa.328170 1.0kb upstream 1.0kb upstream 1000 false scaffold03159: 551118-552117 Cucumis sativus
Cucsa.328170 1.0kb downstream 1.0kb downstream 5829 true scaffold03159: 545289-551117 Cucumis sativus
Cucsa.328170 1.0kb downstream 1.0kb downstream 1000 false scaffold03159: 545289-546288 Cucumis sativus
Cucsa.328170 2.0kb upstream 2.0kb upstream 6829 true scaffold03159: 546289-553117 Cucumis sativus
Cucsa.328170 2.0kb upstream 2.0kb upstream 2000 false scaffold03159: 551118-553117 Cucumis sativus
Cucsa.328170 2.0kb downstream 2.0kb downstream 6829 true scaffold03159: 544289-551117 Cucumis sativus
Cucsa.328170 2.0kb downstream 2.0kb downstream 2000 false scaffold03159: 544289-546288 Cucumis sativus
Cucsa.328170 5.0kb upstream 5.0kb upstream 9829 true scaffold03159: 546289-556117 Cucumis sativus
Cucsa.328170 5.0kb upstream 5.0kb upstream 5000 false scaffold03159: 551118-556117 Cucumis sativus
Cucsa.328170 5.0kb downstream 5.0kb downstream 9829 true scaffold03159: 541289-551117 Cucumis sativus
Cucsa.328170 5.0kb downstream 5.0kb downstream 5000 false scaffold03159: 541289-546288 Cucumis sativus
Cucsa.328170 10.0kb upstream 10.0kb upstream 14829 true scaffold03159: 546289-561117 Cucumis sativus
Cucsa.328170 10.0kb upstream 10.0kb upstream 10000 false scaffold03159: 551118-561117 Cucumis sativus
Cucsa.328170 10.0kb downstream 10.0kb downstream 14829 true scaffold03159: 536289-551117 Cucumis sativus
Cucsa.328170 10.0kb downstream 10.0kb downstream 10000 false scaffold03159: 536289-546288 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299627 5265 Fabidae View MSA
124066699 5270 Rosid View MSA
123739132 5271 Pentapetalae View MSA
122788969 5272 Eudicot View MSA
122045173 5273 Angiosperm View MSA
121310410 5274 Embryophyte View MSA
123347900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain