Gene : Cucsa.346000 C. sativus v1.0
Defline:  (1 of 1) 1.1.1.86 - Ketol-acid reductoisomerase (NADP(+)) / Dihydroxyisovalerate dehydrogenase (isomerizing) Genomic Order:  29
Name:  ? Cucsa.346000 Secondary Identifier:  ? PAC:16979583
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus BRANCHED-CHAIN-AA-SYN-PWY Cucumis sativus pathologic  
Csativus ILEUSYN-PWY Cucumis sativus pathologic  
Csativus PWY-3001 Cucumis sativus pathologic  
Csativus VALSYN-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.346000 0.5kb upstream 0.5kb upstream 4134 true scaffold03443: 281556-285689 Cucumis sativus
Cucsa.346000 0.5kb upstream 0.5kb upstream 500 false scaffold03443: 281556-282055 Cucumis sativus
Cucsa.346000 0.5kb downstream 0.5kb downstream 4134 true scaffold03443: 282056-286189 Cucumis sativus
Cucsa.346000 0.5kb downstream 0.5kb downstream 500 false scaffold03443: 285690-286189 Cucumis sativus
Cucsa.346000 1.0kb upstream 1.0kb upstream 4634 true scaffold03443: 281056-285689 Cucumis sativus
Cucsa.346000 1.0kb upstream 1.0kb upstream 1000 false scaffold03443: 281056-282055 Cucumis sativus
Cucsa.346000 1.0kb downstream 1.0kb downstream 4634 true scaffold03443: 282056-286689 Cucumis sativus
Cucsa.346000 1.0kb downstream 1.0kb downstream 1000 false scaffold03443: 285690-286689 Cucumis sativus
Cucsa.346000 2.0kb upstream 2.0kb upstream 5634 true scaffold03443: 280056-285689 Cucumis sativus
Cucsa.346000 2.0kb upstream 2.0kb upstream 2000 false scaffold03443: 280056-282055 Cucumis sativus
Cucsa.346000 2.0kb downstream 2.0kb downstream 5634 true scaffold03443: 282056-287689 Cucumis sativus
Cucsa.346000 2.0kb downstream 2.0kb downstream 2000 false scaffold03443: 285690-287689 Cucumis sativus
Cucsa.346000 5.0kb upstream 5.0kb upstream 8634 true scaffold03443: 277056-285689 Cucumis sativus
Cucsa.346000 5.0kb upstream 5.0kb upstream 5000 false scaffold03443: 277056-282055 Cucumis sativus
Cucsa.346000 5.0kb downstream 5.0kb downstream 8634 true scaffold03443: 282056-290689 Cucumis sativus
Cucsa.346000 5.0kb downstream 5.0kb downstream 5000 false scaffold03443: 285690-290689 Cucumis sativus
Cucsa.346000 10.0kb upstream 10.0kb upstream 13634 true scaffold03443: 272056-285689 Cucumis sativus
Cucsa.346000 10.0kb upstream 10.0kb upstream 10000 false scaffold03443: 272056-282055 Cucumis sativus
Cucsa.346000 10.0kb downstream 10.0kb downstream 13634 true scaffold03443: 282056-295689 Cucumis sativus
Cucsa.346000 10.0kb downstream 10.0kb downstream 10000 false scaffold03443: 285690-295689 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299493 5265 Fabidae View MSA
124060504 5270 Rosid View MSA
123749649 5271 Pentapetalae View MSA
122794973 5272 Eudicot View MSA
122043531 5273 Angiosperm View MSA
121344443 5274 Embryophyte View MSA
123428276 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain