Gene : Cucsa.348740 C. sativus v1.0
Defline:  (1 of 1) PTHR10168:SF14 - GLUTAREDOXIN-C5, CHLOROPLASTIC-RELATED Genomic Order:  23
Name:  ? Cucsa.348740 Secondary Identifier:  ? PAC:16979651
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus THIOREDOX-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.348740 0.5kb upstream 0.5kb upstream 4182 true scaffold03487: 164670-168851 Cucumis sativus
Cucsa.348740 0.5kb upstream 0.5kb upstream 500 false scaffold03487: 168352-168851 Cucumis sativus
Cucsa.348740 0.5kb downstream 0.5kb downstream 4182 true scaffold03487: 164170-168351 Cucumis sativus
Cucsa.348740 0.5kb downstream 0.5kb downstream 500 false scaffold03487: 164170-164669 Cucumis sativus
Cucsa.348740 1.0kb upstream 1.0kb upstream 4682 true scaffold03487: 164670-169351 Cucumis sativus
Cucsa.348740 1.0kb upstream 1.0kb upstream 1000 false scaffold03487: 168352-169351 Cucumis sativus
Cucsa.348740 1.0kb downstream 1.0kb downstream 4682 true scaffold03487: 163670-168351 Cucumis sativus
Cucsa.348740 1.0kb downstream 1.0kb downstream 1000 false scaffold03487: 163670-164669 Cucumis sativus
Cucsa.348740 2.0kb upstream 2.0kb upstream 5682 true scaffold03487: 164670-170351 Cucumis sativus
Cucsa.348740 2.0kb upstream 2.0kb upstream 2000 false scaffold03487: 168352-170351 Cucumis sativus
Cucsa.348740 2.0kb downstream 2.0kb downstream 5682 true scaffold03487: 162670-168351 Cucumis sativus
Cucsa.348740 2.0kb downstream 2.0kb downstream 2000 false scaffold03487: 162670-164669 Cucumis sativus
Cucsa.348740 5.0kb upstream 5.0kb upstream 8682 true scaffold03487: 164670-173351 Cucumis sativus
Cucsa.348740 5.0kb upstream 5.0kb upstream 5000 false scaffold03487: 168352-173351 Cucumis sativus
Cucsa.348740 5.0kb downstream 5.0kb downstream 8682 true scaffold03487: 159670-168351 Cucumis sativus
Cucsa.348740 5.0kb downstream 5.0kb downstream 5000 false scaffold03487: 159670-164669 Cucumis sativus
Cucsa.348740 10.0kb upstream 10.0kb upstream 13682 true scaffold03487: 164670-178351 Cucumis sativus
Cucsa.348740 10.0kb upstream 10.0kb upstream 10000 false scaffold03487: 168352-178351 Cucumis sativus
Cucsa.348740 10.0kb downstream 10.0kb downstream 13682 true scaffold03487: 154670-168351 Cucumis sativus
Cucsa.348740 10.0kb downstream 10.0kb downstream 10000 false scaffold03487: 154670-164669 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026565 5273 Angiosperm View MSA
122308428 5265 Fabidae View MSA
124066843 5270 Rosid View MSA
123737863 5271 Pentapetalae View MSA
122787960 5272 Eudicot View MSA
121350843 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain