Gene : Cucsa.349640 C. sativus v1.0
Defline:  (1 of 2) PTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN Genomic Order:  113
Name:  ? Cucsa.349640 Secondary Identifier:  ? PAC:16979820
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.349640 0.5kb upstream 0.5kb upstream 6729 true scaffold03487: 862001-868729 Cucumis sativus
Cucsa.349640 0.5kb upstream 0.5kb upstream 500 false scaffold03487: 862001-862500 Cucumis sativus
Cucsa.349640 0.5kb downstream 0.5kb downstream 6729 true scaffold03487: 862501-869229 Cucumis sativus
Cucsa.349640 0.5kb downstream 0.5kb downstream 500 false scaffold03487: 868730-869229 Cucumis sativus
Cucsa.349640 1.0kb upstream 1.0kb upstream 7229 true scaffold03487: 861501-868729 Cucumis sativus
Cucsa.349640 1.0kb upstream 1.0kb upstream 1000 false scaffold03487: 861501-862500 Cucumis sativus
Cucsa.349640 1.0kb downstream 1.0kb downstream 7229 true scaffold03487: 862501-869729 Cucumis sativus
Cucsa.349640 1.0kb downstream 1.0kb downstream 1000 false scaffold03487: 868730-869729 Cucumis sativus
Cucsa.349640 2.0kb upstream 2.0kb upstream 8229 true scaffold03487: 860501-868729 Cucumis sativus
Cucsa.349640 2.0kb upstream 2.0kb upstream 2000 false scaffold03487: 860501-862500 Cucumis sativus
Cucsa.349640 2.0kb downstream 2.0kb downstream 8229 true scaffold03487: 862501-870729 Cucumis sativus
Cucsa.349640 2.0kb downstream 2.0kb downstream 2000 false scaffold03487: 868730-870729 Cucumis sativus
Cucsa.349640 5.0kb upstream 5.0kb upstream 11229 true scaffold03487: 857501-868729 Cucumis sativus
Cucsa.349640 5.0kb upstream 5.0kb upstream 5000 false scaffold03487: 857501-862500 Cucumis sativus
Cucsa.349640 5.0kb downstream 5.0kb downstream 11229 true scaffold03487: 862501-873729 Cucumis sativus
Cucsa.349640 5.0kb downstream 5.0kb downstream 5000 false scaffold03487: 868730-873729 Cucumis sativus
Cucsa.349640 10.0kb upstream 10.0kb upstream 16229 true scaffold03487: 852501-868729 Cucumis sativus
Cucsa.349640 10.0kb upstream 10.0kb upstream 10000 false scaffold03487: 852501-862500 Cucumis sativus
Cucsa.349640 10.0kb downstream 10.0kb downstream 16229 true scaffold03487: 862501-878729 Cucumis sativus
Cucsa.349640 10.0kb downstream 10.0kb downstream 10000 false scaffold03487: 868730-878729 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303824 5265 Fabidae View MSA
124064049 5270 Rosid View MSA
123750627 5271 Pentapetalae View MSA
122793492 5272 Eudicot View MSA
122049609 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain