Gene : Cucsa.378540 C. sativus v1.0
Defline:  (1 of 2) PTHR15921 - PRE-MRNA CLEAVAGE COMPLEX II Genomic Order:  17
Name:  ? Cucsa.378540 Secondary Identifier:  ? PAC:16982064
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.378540 0.5kb upstream 0.5kb upstream 8067 true scaffold03810: 141424-149490 Cucumis sativus
Cucsa.378540 0.5kb upstream 0.5kb upstream 500 false scaffold03810: 148991-149490 Cucumis sativus
Cucsa.378540 0.5kb downstream 0.5kb downstream 8067 true scaffold03810: 140924-148990 Cucumis sativus
Cucsa.378540 0.5kb downstream 0.5kb downstream 500 false scaffold03810: 140924-141423 Cucumis sativus
Cucsa.378540 1.0kb upstream 1.0kb upstream 8567 true scaffold03810: 141424-149990 Cucumis sativus
Cucsa.378540 1.0kb upstream 1.0kb upstream 1000 false scaffold03810: 148991-149990 Cucumis sativus
Cucsa.378540 1.0kb downstream 1.0kb downstream 8567 true scaffold03810: 140424-148990 Cucumis sativus
Cucsa.378540 1.0kb downstream 1.0kb downstream 1000 false scaffold03810: 140424-141423 Cucumis sativus
Cucsa.378540 2.0kb upstream 2.0kb upstream 9567 true scaffold03810: 141424-150990 Cucumis sativus
Cucsa.378540 2.0kb upstream 2.0kb upstream 2000 false scaffold03810: 148991-150990 Cucumis sativus
Cucsa.378540 2.0kb downstream 2.0kb downstream 9567 true scaffold03810: 139424-148990 Cucumis sativus
Cucsa.378540 2.0kb downstream 2.0kb downstream 2000 false scaffold03810: 139424-141423 Cucumis sativus
Cucsa.378540 5.0kb upstream 5.0kb upstream 12567 true scaffold03810: 141424-153990 Cucumis sativus
Cucsa.378540 5.0kb upstream 5.0kb upstream 5000 false scaffold03810: 148991-153990 Cucumis sativus
Cucsa.378540 5.0kb downstream 5.0kb downstream 12567 true scaffold03810: 136424-148990 Cucumis sativus
Cucsa.378540 5.0kb downstream 5.0kb downstream 5000 false scaffold03810: 136424-141423 Cucumis sativus
Cucsa.378540 10.0kb upstream 10.0kb upstream 17567 true scaffold03810: 141424-158990 Cucumis sativus
Cucsa.378540 10.0kb upstream 10.0kb upstream 10000 false scaffold03810: 148991-158990 Cucumis sativus
Cucsa.378540 10.0kb downstream 10.0kb downstream 17567 true scaffold03810: 131424-148990 Cucumis sativus
Cucsa.378540 10.0kb downstream 10.0kb downstream 10000 false scaffold03810: 131424-141423 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300860 5265 Fabidae View MSA
124072237 5270 Rosid View MSA
123741427 5271 Pentapetalae View MSA
122796233 5272 Eudicot View MSA
122048698 5273 Angiosperm View MSA
121349751 5274 Embryophyte View MSA
123426332 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain