Gene : Medtr1g022950 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31898:SF1 - TRANSMEMBRANE PROTEIN 136 Description:  TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain protein
Genomic Order:  957 Name:  ? Medtr1g022950
Secondary Identifier:  ? PAC:31098032
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g022950 0.5kb upstream 0.5kb upstream 3875 true chr1: 7253062-7256936 Medicago truncatula
Medtr1g022950 0.5kb upstream 0.5kb upstream 500 false chr1: 7253062-7253561 Medicago truncatula
Medtr1g022950 0.5kb downstream 0.5kb downstream 3875 true chr1: 7253562-7257436 Medicago truncatula
Medtr1g022950 0.5kb downstream 0.5kb downstream 500 false chr1: 7256937-7257436 Medicago truncatula
Medtr1g022950 1.0kb upstream 1.0kb upstream 4375 true chr1: 7252562-7256936 Medicago truncatula
Medtr1g022950 1.0kb upstream 1.0kb upstream 1000 false chr1: 7252562-7253561 Medicago truncatula
Medtr1g022950 1.0kb downstream 1.0kb downstream 4375 true chr1: 7253562-7257936 Medicago truncatula
Medtr1g022950 1.0kb downstream 1.0kb downstream 1000 false chr1: 7256937-7257936 Medicago truncatula
Medtr1g022950 2.0kb upstream 2.0kb upstream 5375 true chr1: 7251562-7256936 Medicago truncatula
Medtr1g022950 2.0kb upstream 2.0kb upstream 2000 false chr1: 7251562-7253561 Medicago truncatula
Medtr1g022950 2.0kb downstream 2.0kb downstream 5375 true chr1: 7253562-7258936 Medicago truncatula
Medtr1g022950 2.0kb downstream 2.0kb downstream 2000 false chr1: 7256937-7258936 Medicago truncatula
Medtr1g022950 5.0kb upstream 5.0kb upstream 8375 true chr1: 7248562-7256936 Medicago truncatula
Medtr1g022950 5.0kb upstream 5.0kb upstream 5000 false chr1: 7248562-7253561 Medicago truncatula
Medtr1g022950 5.0kb downstream 5.0kb downstream 8375 true chr1: 7253562-7261936 Medicago truncatula
Medtr1g022950 5.0kb downstream 5.0kb downstream 5000 false chr1: 7256937-7261936 Medicago truncatula
Medtr1g022950 10.0kb upstream 10.0kb upstream 13375 true chr1: 7243562-7256936 Medicago truncatula
Medtr1g022950 10.0kb upstream 10.0kb upstream 10000 false chr1: 7243562-7253561 Medicago truncatula
Medtr1g022950 10.0kb downstream 10.0kb downstream 13375 true chr1: 7253562-7266936 Medicago truncatula
Medtr1g022950 10.0kb downstream 10.0kb downstream 10000 false chr1: 7256937-7266936 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304729 5265 Fabidae View MSA
124061810 5270 Rosid View MSA
123740505 5271 Pentapetalae View MSA
122793089 5272 Eudicot View MSA
122047305 5273 Angiosperm View MSA
121344019 5274 Embryophyte View MSA
123425405 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.014     Low Low
cufflinks 1.38        
cufflinks 0.882        
cufflinks 0.12        
cufflinks 1.648       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.089        
cufflinks 0.999        
cufflinks 0.115        

0 Strain