Gene : Medtr1g023510 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10742:SF284 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A Description:  polyamine oxidase
Genomic Order:  998 Name:  ? Medtr1g023510
Secondary Identifier:  ? PAC:31094774
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6441 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g023510 0.5kb upstream 0.5kb upstream 9590 true chr1: 7537822-7547411 Medicago truncatula
Medtr1g023510 0.5kb upstream 0.5kb upstream 500 false chr1: 7546912-7547411 Medicago truncatula
Medtr1g023510 0.5kb downstream 0.5kb downstream 9590 true chr1: 7537322-7546911 Medicago truncatula
Medtr1g023510 0.5kb downstream 0.5kb downstream 500 false chr1: 7537322-7537821 Medicago truncatula
Medtr1g023510 1.0kb upstream 1.0kb upstream 10090 true chr1: 7537822-7547911 Medicago truncatula
Medtr1g023510 1.0kb upstream 1.0kb upstream 1000 false chr1: 7546912-7547911 Medicago truncatula
Medtr1g023510 1.0kb downstream 1.0kb downstream 10090 true chr1: 7536822-7546911 Medicago truncatula
Medtr1g023510 1.0kb downstream 1.0kb downstream 1000 false chr1: 7536822-7537821 Medicago truncatula
Medtr1g023510 2.0kb upstream 2.0kb upstream 11090 true chr1: 7537822-7548911 Medicago truncatula
Medtr1g023510 2.0kb upstream 2.0kb upstream 2000 false chr1: 7546912-7548911 Medicago truncatula
Medtr1g023510 2.0kb downstream 2.0kb downstream 11090 true chr1: 7535822-7546911 Medicago truncatula
Medtr1g023510 2.0kb downstream 2.0kb downstream 2000 false chr1: 7535822-7537821 Medicago truncatula
Medtr1g023510 5.0kb upstream 5.0kb upstream 14090 true chr1: 7537822-7551911 Medicago truncatula
Medtr1g023510 5.0kb upstream 5.0kb upstream 5000 false chr1: 7546912-7551911 Medicago truncatula
Medtr1g023510 5.0kb downstream 5.0kb downstream 14090 true chr1: 7532822-7546911 Medicago truncatula
Medtr1g023510 5.0kb downstream 5.0kb downstream 5000 false chr1: 7532822-7537821 Medicago truncatula
Medtr1g023510 10.0kb upstream 10.0kb upstream 19090 true chr1: 7537822-7556911 Medicago truncatula
Medtr1g023510 10.0kb upstream 10.0kb upstream 10000 false chr1: 7546912-7556911 Medicago truncatula
Medtr1g023510 10.0kb downstream 10.0kb downstream 19090 true chr1: 7527822-7546911 Medicago truncatula
Medtr1g023510 10.0kb downstream 10.0kb downstream 10000 false chr1: 7527822-7537821 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312967 5265 Fabidae View MSA
124062670 5270 Rosid View MSA
123738203 5271 Pentapetalae View MSA
122790962 5272 Eudicot View MSA
122046463 5273 Angiosperm View MSA
121349079 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.295        
cufflinks 1.505        
cufflinks 1.981       High
cufflinks 0.244       Low
cufflinks 1.711        
cufflinks 0.268       Low
cufflinks 0.658        
cufflinks 1.423        
cufflinks 0.505        

0 Strain