Gene : Medtr1g025060 M. truncatula Mt4.0v1
Defline:  (1 of 4) 2.4.2.10 - Orotate phosphoribosyltransferase / Orotidylic acid phosphorylase Description:  uridine 5-monophosphate synthase-like protein
Genomic Order:  1061 Name:  ? Medtr1g025060
Secondary Identifier:  ? PAC:31095834
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY0-162 Medicago truncatula pathologic  
Mtruncatula PWY-5686 Medicago truncatula pathologic  
Mtruncatula PWY-7211 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g025060 0.5kb upstream 0.5kb upstream 5268 true chr1: 7988523-7993790 Medicago truncatula
Medtr1g025060 0.5kb upstream 0.5kb upstream 500 false chr1: 7988523-7989022 Medicago truncatula
Medtr1g025060 0.5kb downstream 0.5kb downstream 5268 true chr1: 7989023-7994290 Medicago truncatula
Medtr1g025060 0.5kb downstream 0.5kb downstream 500 false chr1: 7993791-7994290 Medicago truncatula
Medtr1g025060 1.0kb upstream 1.0kb upstream 5768 true chr1: 7988023-7993790 Medicago truncatula
Medtr1g025060 1.0kb upstream 1.0kb upstream 1000 false chr1: 7988023-7989022 Medicago truncatula
Medtr1g025060 1.0kb downstream 1.0kb downstream 5768 true chr1: 7989023-7994790 Medicago truncatula
Medtr1g025060 1.0kb downstream 1.0kb downstream 1000 false chr1: 7993791-7994790 Medicago truncatula
Medtr1g025060 2.0kb upstream 2.0kb upstream 6768 true chr1: 7987023-7993790 Medicago truncatula
Medtr1g025060 2.0kb upstream 2.0kb upstream 2000 false chr1: 7987023-7989022 Medicago truncatula
Medtr1g025060 2.0kb downstream 2.0kb downstream 6768 true chr1: 7989023-7995790 Medicago truncatula
Medtr1g025060 2.0kb downstream 2.0kb downstream 2000 false chr1: 7993791-7995790 Medicago truncatula
Medtr1g025060 5.0kb upstream 5.0kb upstream 9768 true chr1: 7984023-7993790 Medicago truncatula
Medtr1g025060 5.0kb upstream 5.0kb upstream 5000 false chr1: 7984023-7989022 Medicago truncatula
Medtr1g025060 5.0kb downstream 5.0kb downstream 9768 true chr1: 7989023-7998790 Medicago truncatula
Medtr1g025060 5.0kb downstream 5.0kb downstream 5000 false chr1: 7993791-7998790 Medicago truncatula
Medtr1g025060 10.0kb upstream 10.0kb upstream 14768 true chr1: 7979023-7993790 Medicago truncatula
Medtr1g025060 10.0kb upstream 10.0kb upstream 10000 false chr1: 7979023-7989022 Medicago truncatula
Medtr1g025060 10.0kb downstream 10.0kb downstream 14768 true chr1: 7989023-8003790 Medicago truncatula
Medtr1g025060 10.0kb downstream 10.0kb downstream 10000 false chr1: 7993791-8003790 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300659 5265 Fabidae View MSA
124060638 5270 Rosid View MSA
123751852 5271 Pentapetalae View MSA
122789079 5272 Eudicot View MSA
122042153 5273 Angiosperm View MSA
121351237 5274 Embryophyte View MSA
123424950 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.27        
cufflinks 3.043        
cufflinks 7.066       High
cufflinks 1.794        
cufflinks 6.655       High
cufflinks 0.608       Low
cufflinks 1.847        
cufflinks 5.299        
cufflinks 2.651        

0 Strain