Gene : Medtr1g027070 M. truncatula Mt4.0v1
Defline:  (1 of 9) PF07714//PF13947 - Protein tyrosine kinase (Pkinase_Tyr) // Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) Description:  stress-induced receptor-like kinase
Genomic Order:  1194 Name:  ? Medtr1g027070
Secondary Identifier:  ? PAC:31093136
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7409 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g027070 0.5kb upstream 0.5kb upstream 5337 true chr1: 8941424-8946760 Medicago truncatula
Medtr1g027070 0.5kb upstream 0.5kb upstream 500 false chr1: 8946261-8946760 Medicago truncatula
Medtr1g027070 0.5kb downstream 0.5kb downstream 5337 true chr1: 8940924-8946260 Medicago truncatula
Medtr1g027070 0.5kb downstream 0.5kb downstream 500 false chr1: 8940924-8941423 Medicago truncatula
Medtr1g027070 1.0kb upstream 1.0kb upstream 5837 true chr1: 8941424-8947260 Medicago truncatula
Medtr1g027070 1.0kb upstream 1.0kb upstream 1000 false chr1: 8946261-8947260 Medicago truncatula
Medtr1g027070 1.0kb downstream 1.0kb downstream 5837 true chr1: 8940424-8946260 Medicago truncatula
Medtr1g027070 1.0kb downstream 1.0kb downstream 1000 false chr1: 8940424-8941423 Medicago truncatula
Medtr1g027070 2.0kb upstream 2.0kb upstream 6837 true chr1: 8941424-8948260 Medicago truncatula
Medtr1g027070 2.0kb upstream 2.0kb upstream 2000 false chr1: 8946261-8948260 Medicago truncatula
Medtr1g027070 2.0kb downstream 2.0kb downstream 6837 true chr1: 8939424-8946260 Medicago truncatula
Medtr1g027070 2.0kb downstream 2.0kb downstream 2000 false chr1: 8939424-8941423 Medicago truncatula
Medtr1g027070 5.0kb upstream 5.0kb upstream 9837 true chr1: 8941424-8951260 Medicago truncatula
Medtr1g027070 5.0kb upstream 5.0kb upstream 5000 false chr1: 8946261-8951260 Medicago truncatula
Medtr1g027070 5.0kb downstream 5.0kb downstream 9837 true chr1: 8936424-8946260 Medicago truncatula
Medtr1g027070 5.0kb downstream 5.0kb downstream 5000 false chr1: 8936424-8941423 Medicago truncatula
Medtr1g027070 10.0kb upstream 10.0kb upstream 14837 true chr1: 8941424-8956260 Medicago truncatula
Medtr1g027070 10.0kb upstream 10.0kb upstream 10000 false chr1: 8946261-8956260 Medicago truncatula
Medtr1g027070 10.0kb downstream 10.0kb downstream 14837 true chr1: 8931424-8946260 Medicago truncatula
Medtr1g027070 10.0kb downstream 10.0kb downstream 10000 false chr1: 8931424-8941423 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314435 5265 Fabidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.498       High
cufflinks 0.112        
cufflinks 0.039     Low Low
cufflinks 0.677        
cufflinks 0.061     Low Low
cufflinks 1.955       High
cufflinks 1.536        
cufflinks 0.062     Low  
cufflinks 0.372        

0 Strain