Gene : Medtr1g028280 M. truncatula Mt4.0v1
Defline:  (1 of 16) PF00069//PF13947 - Protein kinase domain (Pkinase) // Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) Description:  stress-induced receptor-like kinase, putative
Genomic Order:  1275 Name:  ? Medtr1g028280
Secondary Identifier:  ? PAC:31098060
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7409 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g028280 0.5kb upstream 0.5kb upstream 3842 true chr1: 9487950-9491791 Medicago truncatula
Medtr1g028280 0.5kb upstream 0.5kb upstream 500 false chr1: 9491292-9491791 Medicago truncatula
Medtr1g028280 0.5kb downstream 0.5kb downstream 3842 true chr1: 9487450-9491291 Medicago truncatula
Medtr1g028280 0.5kb downstream 0.5kb downstream 500 false chr1: 9487450-9487949 Medicago truncatula
Medtr1g028280 1.0kb upstream 1.0kb upstream 4342 true chr1: 9487950-9492291 Medicago truncatula
Medtr1g028280 1.0kb upstream 1.0kb upstream 1000 false chr1: 9491292-9492291 Medicago truncatula
Medtr1g028280 1.0kb downstream 1.0kb downstream 4342 true chr1: 9486950-9491291 Medicago truncatula
Medtr1g028280 1.0kb downstream 1.0kb downstream 1000 false chr1: 9486950-9487949 Medicago truncatula
Medtr1g028280 2.0kb upstream 2.0kb upstream 5342 true chr1: 9487950-9493291 Medicago truncatula
Medtr1g028280 2.0kb upstream 2.0kb upstream 2000 false chr1: 9491292-9493291 Medicago truncatula
Medtr1g028280 2.0kb downstream 2.0kb downstream 5342 true chr1: 9485950-9491291 Medicago truncatula
Medtr1g028280 2.0kb downstream 2.0kb downstream 2000 false chr1: 9485950-9487949 Medicago truncatula
Medtr1g028280 5.0kb upstream 5.0kb upstream 8342 true chr1: 9487950-9496291 Medicago truncatula
Medtr1g028280 5.0kb upstream 5.0kb upstream 5000 false chr1: 9491292-9496291 Medicago truncatula
Medtr1g028280 5.0kb downstream 5.0kb downstream 8342 true chr1: 9482950-9491291 Medicago truncatula
Medtr1g028280 5.0kb downstream 5.0kb downstream 5000 false chr1: 9482950-9487949 Medicago truncatula
Medtr1g028280 10.0kb upstream 10.0kb upstream 13342 true chr1: 9487950-9501291 Medicago truncatula
Medtr1g028280 10.0kb upstream 10.0kb upstream 10000 false chr1: 9491292-9501291 Medicago truncatula
Medtr1g028280 10.0kb downstream 10.0kb downstream 13342 true chr1: 9477950-9491291 Medicago truncatula
Medtr1g028280 10.0kb downstream 10.0kb downstream 10000 false chr1: 9477950-9487949 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314435 5265 Fabidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.057     Low  
cufflinks 0.008     Low  
cufflinks 0.003     Low Low
cufflinks 0.076        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.279       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.146        

0 Strain