Gene : Medtr1g018350 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR21494 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 Description:  SPOC domain protein
Genomic Order:  670 Name:  ? Medtr1g018350
Secondary Identifier:  ? PAC:31095522
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g018350 0.5kb upstream 0.5kb upstream 14069 true chr1: 5255703-5269771 Medicago truncatula
Medtr1g018350 0.5kb upstream 0.5kb upstream 500 false chr1: 5269272-5269771 Medicago truncatula
Medtr1g018350 0.5kb downstream 0.5kb downstream 14069 true chr1: 5255203-5269271 Medicago truncatula
Medtr1g018350 0.5kb downstream 0.5kb downstream 500 false chr1: 5255203-5255702 Medicago truncatula
Medtr1g018350 1.0kb upstream 1.0kb upstream 14569 true chr1: 5255703-5270271 Medicago truncatula
Medtr1g018350 1.0kb upstream 1.0kb upstream 1000 false chr1: 5269272-5270271 Medicago truncatula
Medtr1g018350 1.0kb downstream 1.0kb downstream 14569 true chr1: 5254703-5269271 Medicago truncatula
Medtr1g018350 1.0kb downstream 1.0kb downstream 1000 false chr1: 5254703-5255702 Medicago truncatula
Medtr1g018350 2.0kb upstream 2.0kb upstream 15569 true chr1: 5255703-5271271 Medicago truncatula
Medtr1g018350 2.0kb upstream 2.0kb upstream 2000 false chr1: 5269272-5271271 Medicago truncatula
Medtr1g018350 2.0kb downstream 2.0kb downstream 15569 true chr1: 5253703-5269271 Medicago truncatula
Medtr1g018350 2.0kb downstream 2.0kb downstream 2000 false chr1: 5253703-5255702 Medicago truncatula
Medtr1g018350 5.0kb upstream 5.0kb upstream 18569 true chr1: 5255703-5274271 Medicago truncatula
Medtr1g018350 5.0kb upstream 5.0kb upstream 5000 false chr1: 5269272-5274271 Medicago truncatula
Medtr1g018350 5.0kb downstream 5.0kb downstream 18569 true chr1: 5250703-5269271 Medicago truncatula
Medtr1g018350 5.0kb downstream 5.0kb downstream 5000 false chr1: 5250703-5255702 Medicago truncatula
Medtr1g018350 10.0kb upstream 10.0kb upstream 23569 true chr1: 5255703-5279271 Medicago truncatula
Medtr1g018350 10.0kb upstream 10.0kb upstream 10000 false chr1: 5269272-5279271 Medicago truncatula
Medtr1g018350 10.0kb downstream 10.0kb downstream 23569 true chr1: 5245703-5269271 Medicago truncatula
Medtr1g018350 10.0kb downstream 10.0kb downstream 10000 false chr1: 5245703-5255702 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303978 5265 Fabidae View MSA
124069549 5270 Rosid View MSA
123741319 5271 Pentapetalae View MSA
122794121 5272 Eudicot View MSA
122043099 5273 Angiosperm View MSA
121349744 5274 Embryophyte View MSA
123381424 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.365        
cufflinks 0.638        
cufflinks 0.849        
cufflinks 0.141        
cufflinks 1.027       High
cufflinks 0.053     Low Low
cufflinks 0.235        
cufflinks 0.638        
cufflinks 0.216        

0 Strain