Gene : Medtr1g019540 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11183:SF44 - UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 Description:  UDP-glucuronate:xylan alpha-glucuronosyltransferase
Genomic Order:  759 Name:  ? Medtr1g019540
Secondary Identifier:  ? PAC:31095079
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6313 Medicago truncatula pathologic  
Mtruncatula PWY-6398 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g019540 0.5kb upstream 0.5kb upstream 3904 true chr1: 5911766-5915669 Medicago truncatula
Medtr1g019540 0.5kb upstream 0.5kb upstream 500 false chr1: 5915170-5915669 Medicago truncatula
Medtr1g019540 0.5kb downstream 0.5kb downstream 3904 true chr1: 5911266-5915169 Medicago truncatula
Medtr1g019540 0.5kb downstream 0.5kb downstream 500 false chr1: 5911266-5911765 Medicago truncatula
Medtr1g019540 1.0kb upstream 1.0kb upstream 4404 true chr1: 5911766-5916169 Medicago truncatula
Medtr1g019540 1.0kb upstream 1.0kb upstream 1000 false chr1: 5915170-5916169 Medicago truncatula
Medtr1g019540 1.0kb downstream 1.0kb downstream 4404 true chr1: 5910766-5915169 Medicago truncatula
Medtr1g019540 1.0kb downstream 1.0kb downstream 1000 false chr1: 5910766-5911765 Medicago truncatula
Medtr1g019540 2.0kb upstream 2.0kb upstream 5404 true chr1: 5911766-5917169 Medicago truncatula
Medtr1g019540 2.0kb upstream 2.0kb upstream 2000 false chr1: 5915170-5917169 Medicago truncatula
Medtr1g019540 2.0kb downstream 2.0kb downstream 5404 true chr1: 5909766-5915169 Medicago truncatula
Medtr1g019540 2.0kb downstream 2.0kb downstream 2000 false chr1: 5909766-5911765 Medicago truncatula
Medtr1g019540 5.0kb upstream 5.0kb upstream 8404 true chr1: 5911766-5920169 Medicago truncatula
Medtr1g019540 5.0kb upstream 5.0kb upstream 5000 false chr1: 5915170-5920169 Medicago truncatula
Medtr1g019540 5.0kb downstream 5.0kb downstream 8404 true chr1: 5906766-5915169 Medicago truncatula
Medtr1g019540 5.0kb downstream 5.0kb downstream 5000 false chr1: 5906766-5911765 Medicago truncatula
Medtr1g019540 10.0kb upstream 10.0kb upstream 13404 true chr1: 5911766-5925169 Medicago truncatula
Medtr1g019540 10.0kb upstream 10.0kb upstream 10000 false chr1: 5915170-5925169 Medicago truncatula
Medtr1g019540 10.0kb downstream 10.0kb downstream 13404 true chr1: 5901766-5915169 Medicago truncatula
Medtr1g019540 10.0kb downstream 10.0kb downstream 10000 false chr1: 5901766-5911765 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308144 5265 Fabidae View MSA
124065974 5270 Rosid View MSA
123740056 5271 Pentapetalae View MSA
122792981 5272 Eudicot View MSA
122049566 5273 Angiosperm View MSA
121311478 5274 Embryophyte View MSA
123348771 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.061     Low Low
cufflinks 0.282        
cufflinks 0.166        
cufflinks 0.353        
cufflinks 0.78       High
cufflinks 0.18        
cufflinks 0.406        
cufflinks 0.263        
cufflinks 0.479        

0 Strain