Gene : Medtr1g021680 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR16092 - SEC3/SYNTAXIN-RELATED Description:  exocyst complex component SEC3B
Genomic Order:  860 Name:  ? Medtr1g021680
Secondary Identifier:  ? PAC:31093917
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g021680 0.5kb upstream 0.5kb upstream 14976 true chr1: 6543295-6558270 Medicago truncatula
Medtr1g021680 0.5kb upstream 0.5kb upstream 500 false chr1: 6557771-6558270 Medicago truncatula
Medtr1g021680 0.5kb downstream 0.5kb downstream 14976 true chr1: 6542795-6557770 Medicago truncatula
Medtr1g021680 0.5kb downstream 0.5kb downstream 500 false chr1: 6542795-6543294 Medicago truncatula
Medtr1g021680 1.0kb upstream 1.0kb upstream 15476 true chr1: 6543295-6558770 Medicago truncatula
Medtr1g021680 1.0kb upstream 1.0kb upstream 1000 false chr1: 6557771-6558770 Medicago truncatula
Medtr1g021680 1.0kb downstream 1.0kb downstream 15476 true chr1: 6542295-6557770 Medicago truncatula
Medtr1g021680 1.0kb downstream 1.0kb downstream 1000 false chr1: 6542295-6543294 Medicago truncatula
Medtr1g021680 2.0kb upstream 2.0kb upstream 16476 true chr1: 6543295-6559770 Medicago truncatula
Medtr1g021680 2.0kb upstream 2.0kb upstream 2000 false chr1: 6557771-6559770 Medicago truncatula
Medtr1g021680 2.0kb downstream 2.0kb downstream 16476 true chr1: 6541295-6557770 Medicago truncatula
Medtr1g021680 2.0kb downstream 2.0kb downstream 2000 false chr1: 6541295-6543294 Medicago truncatula
Medtr1g021680 5.0kb upstream 5.0kb upstream 19476 true chr1: 6543295-6562770 Medicago truncatula
Medtr1g021680 5.0kb upstream 5.0kb upstream 5000 false chr1: 6557771-6562770 Medicago truncatula
Medtr1g021680 5.0kb downstream 5.0kb downstream 19476 true chr1: 6538295-6557770 Medicago truncatula
Medtr1g021680 5.0kb downstream 5.0kb downstream 5000 false chr1: 6538295-6543294 Medicago truncatula
Medtr1g021680 10.0kb upstream 10.0kb upstream 24476 true chr1: 6543295-6567770 Medicago truncatula
Medtr1g021680 10.0kb upstream 10.0kb upstream 10000 false chr1: 6557771-6567770 Medicago truncatula
Medtr1g021680 10.0kb downstream 10.0kb downstream 24476 true chr1: 6533295-6557770 Medicago truncatula
Medtr1g021680 10.0kb downstream 10.0kb downstream 10000 false chr1: 6533295-6543294 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305071 5265 Fabidae View MSA
124062272 5270 Rosid View MSA
123744034 5271 Pentapetalae View MSA
122788203 5272 Eudicot View MSA
122043094 5273 Angiosperm View MSA
121346884 5274 Embryophyte View MSA
123428518 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.111        
cufflinks 4.427        
cufflinks 5.342        
cufflinks 1.233       Low
cufflinks 4.787        
cufflinks 0.92       Low
cufflinks 4.359        
cufflinks 4.398        
cufflinks 3.13        

0 Strain