Gene : Medtr1g010100 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR32093:SF13 - SERINE/ARGININE REPETITIVE MATRIX PROTEIN 2 Description:  pre-mRNA-splicing factor cwc-21, putative
Genomic Order:  230 Name:  ? Medtr1g010100
Secondary Identifier:  ? PAC:31097319
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g010100 0.5kb upstream 0.5kb upstream 839 true chr1: 1738827-1739665 Medicago truncatula
Medtr1g010100 0.5kb upstream 0.5kb upstream 500 false chr1: 1739166-1739665 Medicago truncatula
Medtr1g010100 0.5kb downstream 0.5kb downstream 839 true chr1: 1738327-1739165 Medicago truncatula
Medtr1g010100 0.5kb downstream 0.5kb downstream 500 false chr1: 1738327-1738826 Medicago truncatula
Medtr1g010100 1.0kb upstream 1.0kb upstream 1339 true chr1: 1738827-1740165 Medicago truncatula
Medtr1g010100 1.0kb upstream 1.0kb upstream 1000 false chr1: 1739166-1740165 Medicago truncatula
Medtr1g010100 1.0kb downstream 1.0kb downstream 1339 true chr1: 1737827-1739165 Medicago truncatula
Medtr1g010100 1.0kb downstream 1.0kb downstream 1000 false chr1: 1737827-1738826 Medicago truncatula
Medtr1g010100 2.0kb upstream 2.0kb upstream 2339 true chr1: 1738827-1741165 Medicago truncatula
Medtr1g010100 2.0kb upstream 2.0kb upstream 2000 false chr1: 1739166-1741165 Medicago truncatula
Medtr1g010100 2.0kb downstream 2.0kb downstream 2339 true chr1: 1736827-1739165 Medicago truncatula
Medtr1g010100 2.0kb downstream 2.0kb downstream 2000 false chr1: 1736827-1738826 Medicago truncatula
Medtr1g010100 5.0kb upstream 5.0kb upstream 5339 true chr1: 1738827-1744165 Medicago truncatula
Medtr1g010100 5.0kb upstream 5.0kb upstream 5000 false chr1: 1739166-1744165 Medicago truncatula
Medtr1g010100 5.0kb downstream 5.0kb downstream 5339 true chr1: 1733827-1739165 Medicago truncatula
Medtr1g010100 5.0kb downstream 5.0kb downstream 5000 false chr1: 1733827-1738826 Medicago truncatula
Medtr1g010100 10.0kb upstream 10.0kb upstream 10339 true chr1: 1738827-1749165 Medicago truncatula
Medtr1g010100 10.0kb upstream 10.0kb upstream 10000 false chr1: 1739166-1749165 Medicago truncatula
Medtr1g010100 10.0kb downstream 10.0kb downstream 10339 true chr1: 1728827-1739165 Medicago truncatula
Medtr1g010100 10.0kb downstream 10.0kb downstream 10000 false chr1: 1728827-1738826 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295376 5265 Fabidae View MSA
124038624 5270 Rosid View MSA
123744127 5271 Pentapetalae View MSA
122795539 5272 Eudicot View MSA
122049103 5273 Angiosperm View MSA
121350185 5274 Embryophyte View MSA
123426025 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 100.187     High  
cufflinks 71.63     High  
cufflinks 97.184     High  
cufflinks 14.653     High Low
cufflinks 68.723     High  
cufflinks 18.801     High Low
cufflinks 32.198     High  
cufflinks 105.616     High High
cufflinks 15.824     High Low

0 Strain