Gene : Medtr1g012430 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23024//PTHR23024:SF184 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Description:  alpha/beta hydrolase fold protein
Genomic Order:  321 Name:  ? Medtr1g012430
Secondary Identifier:  ? PAC:31095341
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6303 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g012430 0.5kb upstream 0.5kb upstream 1751 true chr1: 2466106-2467856 Medicago truncatula
Medtr1g012430 0.5kb upstream 0.5kb upstream 500 false chr1: 2467357-2467856 Medicago truncatula
Medtr1g012430 0.5kb downstream 0.5kb downstream 1751 true chr1: 2465606-2467356 Medicago truncatula
Medtr1g012430 0.5kb downstream 0.5kb downstream 500 false chr1: 2465606-2466105 Medicago truncatula
Medtr1g012430 1.0kb upstream 1.0kb upstream 2251 true chr1: 2466106-2468356 Medicago truncatula
Medtr1g012430 1.0kb upstream 1.0kb upstream 1000 false chr1: 2467357-2468356 Medicago truncatula
Medtr1g012430 1.0kb downstream 1.0kb downstream 2251 true chr1: 2465106-2467356 Medicago truncatula
Medtr1g012430 1.0kb downstream 1.0kb downstream 1000 false chr1: 2465106-2466105 Medicago truncatula
Medtr1g012430 2.0kb upstream 2.0kb upstream 3251 true chr1: 2466106-2469356 Medicago truncatula
Medtr1g012430 2.0kb upstream 2.0kb upstream 2000 false chr1: 2467357-2469356 Medicago truncatula
Medtr1g012430 2.0kb downstream 2.0kb downstream 3251 true chr1: 2464106-2467356 Medicago truncatula
Medtr1g012430 2.0kb downstream 2.0kb downstream 2000 false chr1: 2464106-2466105 Medicago truncatula
Medtr1g012430 5.0kb upstream 5.0kb upstream 6251 true chr1: 2466106-2472356 Medicago truncatula
Medtr1g012430 5.0kb upstream 5.0kb upstream 5000 false chr1: 2467357-2472356 Medicago truncatula
Medtr1g012430 5.0kb downstream 5.0kb downstream 6251 true chr1: 2461106-2467356 Medicago truncatula
Medtr1g012430 5.0kb downstream 5.0kb downstream 5000 false chr1: 2461106-2466105 Medicago truncatula
Medtr1g012430 10.0kb upstream 10.0kb upstream 11251 true chr1: 2466106-2477356 Medicago truncatula
Medtr1g012430 10.0kb upstream 10.0kb upstream 10000 false chr1: 2467357-2477356 Medicago truncatula
Medtr1g012430 10.0kb downstream 10.0kb downstream 11251 true chr1: 2456106-2467356 Medicago truncatula
Medtr1g012430 10.0kb downstream 10.0kb downstream 10000 false chr1: 2456106-2466105 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306742 5265 Fabidae View MSA
124070223 5270 Rosid View MSA
123742563 5271 Pentapetalae View MSA
122794707 5272 Eudicot View MSA
122049583 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121311487 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.746        
cufflinks 0.115        
cufflinks 0.066     Low Low
cufflinks 0.55        
cufflinks 0.381        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.229        
cufflinks 0.088       Low
cufflinks 1.507       High

0 Strain