Gene : Medtr1g013620 M. truncatula Mt4.0v1
Description:  ubiquitin-protein ligase, putative Genomic Order:  433
Name:  ? Medtr1g013620 Secondary Identifier:  ? PAC:31094435
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g013620 0.5kb upstream 0.5kb upstream 2026 true chr1: 3340899-3342924 Medicago truncatula
Medtr1g013620 0.5kb upstream 0.5kb upstream 500 false chr1: 3340899-3341398 Medicago truncatula
Medtr1g013620 0.5kb downstream 0.5kb downstream 2026 true chr1: 3341399-3343424 Medicago truncatula
Medtr1g013620 0.5kb downstream 0.5kb downstream 500 false chr1: 3342925-3343424 Medicago truncatula
Medtr1g013620 1.0kb upstream 1.0kb upstream 2526 true chr1: 3340399-3342924 Medicago truncatula
Medtr1g013620 1.0kb upstream 1.0kb upstream 1000 false chr1: 3340399-3341398 Medicago truncatula
Medtr1g013620 1.0kb downstream 1.0kb downstream 2526 true chr1: 3341399-3343924 Medicago truncatula
Medtr1g013620 1.0kb downstream 1.0kb downstream 1000 false chr1: 3342925-3343924 Medicago truncatula
Medtr1g013620 2.0kb upstream 2.0kb upstream 3526 true chr1: 3339399-3342924 Medicago truncatula
Medtr1g013620 2.0kb upstream 2.0kb upstream 2000 false chr1: 3339399-3341398 Medicago truncatula
Medtr1g013620 2.0kb downstream 2.0kb downstream 3526 true chr1: 3341399-3344924 Medicago truncatula
Medtr1g013620 2.0kb downstream 2.0kb downstream 2000 false chr1: 3342925-3344924 Medicago truncatula
Medtr1g013620 5.0kb upstream 5.0kb upstream 6526 true chr1: 3336399-3342924 Medicago truncatula
Medtr1g013620 5.0kb upstream 5.0kb upstream 5000 false chr1: 3336399-3341398 Medicago truncatula
Medtr1g013620 5.0kb downstream 5.0kb downstream 6526 true chr1: 3341399-3347924 Medicago truncatula
Medtr1g013620 5.0kb downstream 5.0kb downstream 5000 false chr1: 3342925-3347924 Medicago truncatula
Medtr1g013620 10.0kb upstream 10.0kb upstream 11526 true chr1: 3331399-3342924 Medicago truncatula
Medtr1g013620 10.0kb upstream 10.0kb upstream 10000 false chr1: 3331399-3341398 Medicago truncatula
Medtr1g013620 10.0kb downstream 10.0kb downstream 11526 true chr1: 3341399-3352924 Medicago truncatula
Medtr1g013620 10.0kb downstream 10.0kb downstream 10000 false chr1: 3342925-3352924 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313528 5265 Fabidae View MSA
124050789 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low High
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain