Gene : Medtr1g014040 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11941:SF96 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 2, MITOCHONDRIAL Description:  enoyl-CoA hydratase/isomerase
Genomic Order:  407 Name:  ? Medtr1g014040
Secondary Identifier:  ? PAC:31092711
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7574 Medicago truncatula pathologic  
Mtruncatula VALDEG-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g014040 0.5kb upstream 0.5kb upstream 10034 true chr1: 3159196-3169229 Medicago truncatula
Medtr1g014040 0.5kb upstream 0.5kb upstream 500 false chr1: 3159196-3159695 Medicago truncatula
Medtr1g014040 0.5kb downstream 0.5kb downstream 10034 true chr1: 3159696-3169729 Medicago truncatula
Medtr1g014040 0.5kb downstream 0.5kb downstream 500 false chr1: 3169230-3169729 Medicago truncatula
Medtr1g014040 1.0kb upstream 1.0kb upstream 10534 true chr1: 3158696-3169229 Medicago truncatula
Medtr1g014040 1.0kb upstream 1.0kb upstream 1000 false chr1: 3158696-3159695 Medicago truncatula
Medtr1g014040 1.0kb downstream 1.0kb downstream 10534 true chr1: 3159696-3170229 Medicago truncatula
Medtr1g014040 1.0kb downstream 1.0kb downstream 1000 false chr1: 3169230-3170229 Medicago truncatula
Medtr1g014040 2.0kb upstream 2.0kb upstream 11534 true chr1: 3157696-3169229 Medicago truncatula
Medtr1g014040 2.0kb upstream 2.0kb upstream 2000 false chr1: 3157696-3159695 Medicago truncatula
Medtr1g014040 2.0kb downstream 2.0kb downstream 11534 true chr1: 3159696-3171229 Medicago truncatula
Medtr1g014040 2.0kb downstream 2.0kb downstream 2000 false chr1: 3169230-3171229 Medicago truncatula
Medtr1g014040 5.0kb upstream 5.0kb upstream 14534 true chr1: 3154696-3169229 Medicago truncatula
Medtr1g014040 5.0kb upstream 5.0kb upstream 5000 false chr1: 3154696-3159695 Medicago truncatula
Medtr1g014040 5.0kb downstream 5.0kb downstream 14534 true chr1: 3159696-3174229 Medicago truncatula
Medtr1g014040 5.0kb downstream 5.0kb downstream 5000 false chr1: 3169230-3174229 Medicago truncatula
Medtr1g014040 10.0kb upstream 10.0kb upstream 19534 true chr1: 3149696-3169229 Medicago truncatula
Medtr1g014040 10.0kb upstream 10.0kb upstream 10000 false chr1: 3149696-3159695 Medicago truncatula
Medtr1g014040 10.0kb downstream 10.0kb downstream 19534 true chr1: 3159696-3179229 Medicago truncatula
Medtr1g014040 10.0kb downstream 10.0kb downstream 10000 false chr1: 3169230-3179229 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304938 5265 Fabidae View MSA
124062114 5270 Rosid View MSA
123739343 5271 Pentapetalae View MSA
122794700 5272 Eudicot View MSA
122041951 5273 Angiosperm View MSA
121350478 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.924        
cufflinks 0.616        
cufflinks 0.639        
cufflinks 0.854        
cufflinks 1.563       High
cufflinks 0.476       Low
cufflinks 1.28        
cufflinks 0.627        
cufflinks 1.844       High

0 Strain