Gene : Medtr1g016070 M. truncatula Mt4.0v1
Defline:  (1 of 3) 1.14.19.4 - Delta(8)-fatty-acid desaturase / SLD Description:  fatty acid/sphingolipid desaturase
Genomic Order:  538 Name:  ? Medtr1g016070
Secondary Identifier:  ? PAC:31093335
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7601 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g016070 0.5kb upstream 0.5kb upstream 2267 true chr1: 4194561-4196827 Medicago truncatula
Medtr1g016070 0.5kb upstream 0.5kb upstream 500 false chr1: 4194561-4195060 Medicago truncatula
Medtr1g016070 0.5kb downstream 0.5kb downstream 2267 true chr1: 4195061-4197327 Medicago truncatula
Medtr1g016070 0.5kb downstream 0.5kb downstream 500 false chr1: 4196828-4197327 Medicago truncatula
Medtr1g016070 1.0kb upstream 1.0kb upstream 2767 true chr1: 4194061-4196827 Medicago truncatula
Medtr1g016070 1.0kb upstream 1.0kb upstream 1000 false chr1: 4194061-4195060 Medicago truncatula
Medtr1g016070 1.0kb downstream 1.0kb downstream 2767 true chr1: 4195061-4197827 Medicago truncatula
Medtr1g016070 1.0kb downstream 1.0kb downstream 1000 false chr1: 4196828-4197827 Medicago truncatula
Medtr1g016070 2.0kb upstream 2.0kb upstream 3767 true chr1: 4193061-4196827 Medicago truncatula
Medtr1g016070 2.0kb upstream 2.0kb upstream 2000 false chr1: 4193061-4195060 Medicago truncatula
Medtr1g016070 2.0kb downstream 2.0kb downstream 3767 true chr1: 4195061-4198827 Medicago truncatula
Medtr1g016070 2.0kb downstream 2.0kb downstream 2000 false chr1: 4196828-4198827 Medicago truncatula
Medtr1g016070 5.0kb upstream 5.0kb upstream 6767 true chr1: 4190061-4196827 Medicago truncatula
Medtr1g016070 5.0kb upstream 5.0kb upstream 5000 false chr1: 4190061-4195060 Medicago truncatula
Medtr1g016070 5.0kb downstream 5.0kb downstream 6767 true chr1: 4195061-4201827 Medicago truncatula
Medtr1g016070 5.0kb downstream 5.0kb downstream 5000 false chr1: 4196828-4201827 Medicago truncatula
Medtr1g016070 10.0kb upstream 10.0kb upstream 11767 true chr1: 4185061-4196827 Medicago truncatula
Medtr1g016070 10.0kb upstream 10.0kb upstream 10000 false chr1: 4185061-4195060 Medicago truncatula
Medtr1g016070 10.0kb downstream 10.0kb downstream 11767 true chr1: 4195061-4206827 Medicago truncatula
Medtr1g016070 10.0kb downstream 10.0kb downstream 10000 false chr1: 4196828-4206827 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047499 5273 Angiosperm View MSA
122311005 5265 Fabidae View MSA
124071375 5270 Rosid View MSA
123743417 5271 Pentapetalae View MSA
122792306 5272 Eudicot View MSA
121347259 5274 Embryophyte View MSA
123427370 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.039     Low Low
cufflinks 5.715        
cufflinks 3.163        
cufflinks 0.692        
cufflinks 9.762       High
cufflinks 0.727        
cufflinks 0.622        
cufflinks 3.234        
cufflinks 1.877        

0 Strain