Gene : Medtr1g016510 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11034:SF23 - N-MYC DOWNREGULATED-LIKE 3 PROTEIN Description:  pollen-specific SF21-like protein
Genomic Order:  575 Name:  ? Medtr1g016510
Secondary Identifier:  ? PAC:31096995
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g016510 0.5kb upstream 0.5kb upstream 5799 true chr1: 4416255-4422053 Medicago truncatula
Medtr1g016510 0.5kb upstream 0.5kb upstream 500 false chr1: 4421554-4422053 Medicago truncatula
Medtr1g016510 0.5kb downstream 0.5kb downstream 5799 true chr1: 4415755-4421553 Medicago truncatula
Medtr1g016510 0.5kb downstream 0.5kb downstream 500 false chr1: 4415755-4416254 Medicago truncatula
Medtr1g016510 1.0kb upstream 1.0kb upstream 6299 true chr1: 4416255-4422553 Medicago truncatula
Medtr1g016510 1.0kb upstream 1.0kb upstream 1000 false chr1: 4421554-4422553 Medicago truncatula
Medtr1g016510 1.0kb downstream 1.0kb downstream 6299 true chr1: 4415255-4421553 Medicago truncatula
Medtr1g016510 1.0kb downstream 1.0kb downstream 1000 false chr1: 4415255-4416254 Medicago truncatula
Medtr1g016510 2.0kb upstream 2.0kb upstream 7299 true chr1: 4416255-4423553 Medicago truncatula
Medtr1g016510 2.0kb upstream 2.0kb upstream 2000 false chr1: 4421554-4423553 Medicago truncatula
Medtr1g016510 2.0kb downstream 2.0kb downstream 7299 true chr1: 4414255-4421553 Medicago truncatula
Medtr1g016510 2.0kb downstream 2.0kb downstream 2000 false chr1: 4414255-4416254 Medicago truncatula
Medtr1g016510 5.0kb upstream 5.0kb upstream 10299 true chr1: 4416255-4426553 Medicago truncatula
Medtr1g016510 5.0kb upstream 5.0kb upstream 5000 false chr1: 4421554-4426553 Medicago truncatula
Medtr1g016510 5.0kb downstream 5.0kb downstream 10299 true chr1: 4411255-4421553 Medicago truncatula
Medtr1g016510 5.0kb downstream 5.0kb downstream 5000 false chr1: 4411255-4416254 Medicago truncatula
Medtr1g016510 10.0kb upstream 10.0kb upstream 15299 true chr1: 4416255-4431553 Medicago truncatula
Medtr1g016510 10.0kb upstream 10.0kb upstream 10000 false chr1: 4421554-4431553 Medicago truncatula
Medtr1g016510 10.0kb downstream 10.0kb downstream 15299 true chr1: 4406255-4421553 Medicago truncatula
Medtr1g016510 10.0kb downstream 10.0kb downstream 10000 false chr1: 4406255-4416254 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310930 5265 Fabidae View MSA
124071063 5270 Rosid View MSA
123743242 5271 Pentapetalae View MSA
122795895 5272 Eudicot View MSA
122051433 5273 Angiosperm View MSA
121349062 5274 Embryophyte View MSA
123381146 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.494        
cufflinks 1.016        
cufflinks 0.519        
cufflinks 0.066     Low Low
cufflinks 1.093       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.411        
cufflinks 0.489        
cufflinks 0.488        

0 Strain