Gene : Medtr1g016490 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 Description:  BEL1-like homeodomain protein
Genomic Order:  574 Name:  ? Medtr1g016490
Secondary Identifier:  ? PAC:31100004
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g016490 0.5kb upstream 0.5kb upstream 3266 true chr1: 4409607-4412872 Medicago truncatula
Medtr1g016490 0.5kb upstream 0.5kb upstream 500 false chr1: 4409607-4410106 Medicago truncatula
Medtr1g016490 0.5kb downstream 0.5kb downstream 3266 true chr1: 4410107-4413372 Medicago truncatula
Medtr1g016490 0.5kb downstream 0.5kb downstream 500 false chr1: 4412873-4413372 Medicago truncatula
Medtr1g016490 1.0kb upstream 1.0kb upstream 3766 true chr1: 4409107-4412872 Medicago truncatula
Medtr1g016490 1.0kb upstream 1.0kb upstream 1000 false chr1: 4409107-4410106 Medicago truncatula
Medtr1g016490 1.0kb downstream 1.0kb downstream 3766 true chr1: 4410107-4413872 Medicago truncatula
Medtr1g016490 1.0kb downstream 1.0kb downstream 1000 false chr1: 4412873-4413872 Medicago truncatula
Medtr1g016490 2.0kb upstream 2.0kb upstream 4766 true chr1: 4408107-4412872 Medicago truncatula
Medtr1g016490 2.0kb upstream 2.0kb upstream 2000 false chr1: 4408107-4410106 Medicago truncatula
Medtr1g016490 2.0kb downstream 2.0kb downstream 4766 true chr1: 4410107-4414872 Medicago truncatula
Medtr1g016490 2.0kb downstream 2.0kb downstream 2000 false chr1: 4412873-4414872 Medicago truncatula
Medtr1g016490 5.0kb upstream 5.0kb upstream 7766 true chr1: 4405107-4412872 Medicago truncatula
Medtr1g016490 5.0kb upstream 5.0kb upstream 5000 false chr1: 4405107-4410106 Medicago truncatula
Medtr1g016490 5.0kb downstream 5.0kb downstream 7766 true chr1: 4410107-4417872 Medicago truncatula
Medtr1g016490 5.0kb downstream 5.0kb downstream 5000 false chr1: 4412873-4417872 Medicago truncatula
Medtr1g016490 10.0kb upstream 10.0kb upstream 12766 true chr1: 4400107-4412872 Medicago truncatula
Medtr1g016490 10.0kb upstream 10.0kb upstream 10000 false chr1: 4400107-4410106 Medicago truncatula
Medtr1g016490 10.0kb downstream 10.0kb downstream 12766 true chr1: 4410107-4422872 Medicago truncatula
Medtr1g016490 10.0kb downstream 10.0kb downstream 10000 false chr1: 4412873-4422872 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026468 5273 Angiosperm View MSA
122311728 5265 Fabidae View MSA
124067667 5270 Rosid View MSA
123747040 5271 Pentapetalae View MSA
122793923 5272 Eudicot View MSA
121296345 5274 Embryophyte View MSA
123334524 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.059     Low  
cufflinks 0.016     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.047     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain