Gene : Medtr1g016740 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  578
Name:  ? Medtr1g016740 Secondary Identifier:  ? PAC:31097927
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g016740 0.5kb upstream 0.5kb upstream 4927 true chr1: 4442569-4447495 Medicago truncatula
Medtr1g016740 0.5kb upstream 0.5kb upstream 500 false chr1: 4446996-4447495 Medicago truncatula
Medtr1g016740 0.5kb downstream 0.5kb downstream 4927 true chr1: 4442069-4446995 Medicago truncatula
Medtr1g016740 0.5kb downstream 0.5kb downstream 500 false chr1: 4442069-4442568 Medicago truncatula
Medtr1g016740 1.0kb upstream 1.0kb upstream 5427 true chr1: 4442569-4447995 Medicago truncatula
Medtr1g016740 1.0kb upstream 1.0kb upstream 1000 false chr1: 4446996-4447995 Medicago truncatula
Medtr1g016740 1.0kb downstream 1.0kb downstream 5427 true chr1: 4441569-4446995 Medicago truncatula
Medtr1g016740 1.0kb downstream 1.0kb downstream 1000 false chr1: 4441569-4442568 Medicago truncatula
Medtr1g016740 2.0kb upstream 2.0kb upstream 6427 true chr1: 4442569-4448995 Medicago truncatula
Medtr1g016740 2.0kb upstream 2.0kb upstream 2000 false chr1: 4446996-4448995 Medicago truncatula
Medtr1g016740 2.0kb downstream 2.0kb downstream 6427 true chr1: 4440569-4446995 Medicago truncatula
Medtr1g016740 2.0kb downstream 2.0kb downstream 2000 false chr1: 4440569-4442568 Medicago truncatula
Medtr1g016740 5.0kb upstream 5.0kb upstream 9427 true chr1: 4442569-4451995 Medicago truncatula
Medtr1g016740 5.0kb upstream 5.0kb upstream 5000 false chr1: 4446996-4451995 Medicago truncatula
Medtr1g016740 5.0kb downstream 5.0kb downstream 9427 true chr1: 4437569-4446995 Medicago truncatula
Medtr1g016740 5.0kb downstream 5.0kb downstream 5000 false chr1: 4437569-4442568 Medicago truncatula
Medtr1g016740 10.0kb upstream 10.0kb upstream 14427 true chr1: 4442569-4456995 Medicago truncatula
Medtr1g016740 10.0kb upstream 10.0kb upstream 10000 false chr1: 4446996-4456995 Medicago truncatula
Medtr1g016740 10.0kb downstream 10.0kb downstream 14427 true chr1: 4432569-4446995 Medicago truncatula
Medtr1g016740 10.0kb downstream 10.0kb downstream 10000 false chr1: 4432569-4442568 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026555 5273 Angiosperm View MSA
122296449 5265 Fabidae View MSA
124070957 5270 Rosid View MSA
123740647 5271 Pentapetalae View MSA
122788070 5272 Eudicot View MSA
121349076 5274 Embryophyte View MSA
123381154 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.775        
cufflinks 0.165        
cufflinks 0.205        
cufflinks 0.397        
cufflinks 0.319        
cufflinks 0.163       Low
cufflinks 1.345       High
cufflinks 0.213        
cufflinks 1.574       High

0 Strain