Gene : Medtr1g052680 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  2731
Name:  ? Medtr1g052680 Secondary Identifier:  ? PAC:31094867
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g052680 0.5kb upstream 0.5kb upstream 1942 true chr1: 21618748-21620689 Medicago truncatula
Medtr1g052680 0.5kb upstream 0.5kb upstream 500 false chr1: 21618748-21619247 Medicago truncatula
Medtr1g052680 0.5kb downstream 0.5kb downstream 1942 true chr1: 21619248-21621189 Medicago truncatula
Medtr1g052680 0.5kb downstream 0.5kb downstream 500 false chr1: 21620690-21621189 Medicago truncatula
Medtr1g052680 1.0kb upstream 1.0kb upstream 2442 true chr1: 21618248-21620689 Medicago truncatula
Medtr1g052680 1.0kb upstream 1.0kb upstream 1000 false chr1: 21618248-21619247 Medicago truncatula
Medtr1g052680 1.0kb downstream 1.0kb downstream 2442 true chr1: 21619248-21621689 Medicago truncatula
Medtr1g052680 1.0kb downstream 1.0kb downstream 1000 false chr1: 21620690-21621689 Medicago truncatula
Medtr1g052680 2.0kb upstream 2.0kb upstream 3442 true chr1: 21617248-21620689 Medicago truncatula
Medtr1g052680 2.0kb upstream 2.0kb upstream 2000 false chr1: 21617248-21619247 Medicago truncatula
Medtr1g052680 2.0kb downstream 2.0kb downstream 3442 true chr1: 21619248-21622689 Medicago truncatula
Medtr1g052680 2.0kb downstream 2.0kb downstream 2000 false chr1: 21620690-21622689 Medicago truncatula
Medtr1g052680 5.0kb upstream 5.0kb upstream 6442 true chr1: 21614248-21620689 Medicago truncatula
Medtr1g052680 5.0kb upstream 5.0kb upstream 5000 false chr1: 21614248-21619247 Medicago truncatula
Medtr1g052680 5.0kb downstream 5.0kb downstream 6442 true chr1: 21619248-21625689 Medicago truncatula
Medtr1g052680 5.0kb downstream 5.0kb downstream 5000 false chr1: 21620690-21625689 Medicago truncatula
Medtr1g052680 10.0kb upstream 10.0kb upstream 11442 true chr1: 21609248-21620689 Medicago truncatula
Medtr1g052680 10.0kb upstream 10.0kb upstream 10000 false chr1: 21609248-21619247 Medicago truncatula
Medtr1g052680 10.0kb downstream 10.0kb downstream 11442 true chr1: 21619248-21630689 Medicago truncatula
Medtr1g052680 10.0kb downstream 10.0kb downstream 10000 false chr1: 21620690-21630689 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312764 5265 Fabidae View MSA
124050526 5270 Rosid View MSA
123743609 5271 Pentapetalae View MSA
122795780 5272 Eudicot View MSA
122044471 5273 Angiosperm View MSA
121351631 5274 Embryophyte View MSA
123382253 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.322     High  
cufflinks 0.783        
cufflinks 0.787        
cufflinks 0.945        
cufflinks 7.756        
cufflinks 77.014     High High
cufflinks 14.916     High  
cufflinks 0.472       Low
cufflinks 7.565        

0 Strain