Gene : Medtr1g008200 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR12356:SF3 - NUCLEAR MIGRATION PROTEIN NUDC Description:  nuclear movement family protein
Genomic Order:  111 Name:  ? Medtr1g008200
Secondary Identifier:  ? PAC:31097118
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g008200 0.5kb upstream 0.5kb upstream 3768 true chr1: 782812-786579 Medicago truncatula
Medtr1g008200 0.5kb upstream 0.5kb upstream 500 false chr1: 782812-783311 Medicago truncatula
Medtr1g008200 0.5kb downstream 0.5kb downstream 3768 true chr1: 783312-787079 Medicago truncatula
Medtr1g008200 0.5kb downstream 0.5kb downstream 500 false chr1: 786580-787079 Medicago truncatula
Medtr1g008200 1.0kb upstream 1.0kb upstream 4268 true chr1: 782312-786579 Medicago truncatula
Medtr1g008200 1.0kb upstream 1.0kb upstream 1000 false chr1: 782312-783311 Medicago truncatula
Medtr1g008200 1.0kb downstream 1.0kb downstream 4268 true chr1: 783312-787579 Medicago truncatula
Medtr1g008200 1.0kb downstream 1.0kb downstream 1000 false chr1: 786580-787579 Medicago truncatula
Medtr1g008200 2.0kb upstream 2.0kb upstream 5268 true chr1: 781312-786579 Medicago truncatula
Medtr1g008200 2.0kb upstream 2.0kb upstream 2000 false chr1: 781312-783311 Medicago truncatula
Medtr1g008200 2.0kb downstream 2.0kb downstream 5268 true chr1: 783312-788579 Medicago truncatula
Medtr1g008200 2.0kb downstream 2.0kb downstream 2000 false chr1: 786580-788579 Medicago truncatula
Medtr1g008200 5.0kb upstream 5.0kb upstream 8268 true chr1: 778312-786579 Medicago truncatula
Medtr1g008200 5.0kb upstream 5.0kb upstream 5000 false chr1: 778312-783311 Medicago truncatula
Medtr1g008200 5.0kb downstream 5.0kb downstream 8268 true chr1: 783312-791579 Medicago truncatula
Medtr1g008200 5.0kb downstream 5.0kb downstream 5000 false chr1: 786580-791579 Medicago truncatula
Medtr1g008200 10.0kb upstream 10.0kb upstream 13268 true chr1: 773312-786579 Medicago truncatula
Medtr1g008200 10.0kb upstream 10.0kb upstream 10000 false chr1: 773312-783311 Medicago truncatula
Medtr1g008200 10.0kb downstream 10.0kb downstream 13268 true chr1: 783312-796579 Medicago truncatula
Medtr1g008200 10.0kb downstream 10.0kb downstream 10000 false chr1: 786580-796579 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308608 5265 Fabidae View MSA
124064550 5270 Rosid View MSA
123752804 5271 Pentapetalae View MSA
122796165 5272 Eudicot View MSA
122044213 5273 Angiosperm View MSA
121350395 5274 Embryophyte View MSA
123424343 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.788     High High
cufflinks 8.151        
cufflinks 5.094       Low
cufflinks 11.855     High High
cufflinks 7.496        
cufflinks 7.602        
cufflinks 9.604        
cufflinks 4.612       Low
cufflinks 11.37     High  

0 Strain