Gene : Medtr1g059080 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR21576//PTHR21576:SF40 - UNCHARACTERIZED NODULIN-LIKE PROTEIN Description:  MFS transporter
Genomic Order:  2743 Name:  ? Medtr1g059080
Secondary Identifier:  ? PAC:31097333
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g059080 0.5kb upstream 0.5kb upstream 2435 true chr1: 21775765-21778199 Medicago truncatula
Medtr1g059080 0.5kb upstream 0.5kb upstream 500 false chr1: 21775765-21776264 Medicago truncatula
Medtr1g059080 0.5kb downstream 0.5kb downstream 2435 true chr1: 21776265-21778699 Medicago truncatula
Medtr1g059080 0.5kb downstream 0.5kb downstream 500 false chr1: 21778200-21778699 Medicago truncatula
Medtr1g059080 1.0kb upstream 1.0kb upstream 2935 true chr1: 21775265-21778199 Medicago truncatula
Medtr1g059080 1.0kb upstream 1.0kb upstream 1000 false chr1: 21775265-21776264 Medicago truncatula
Medtr1g059080 1.0kb downstream 1.0kb downstream 2935 true chr1: 21776265-21779199 Medicago truncatula
Medtr1g059080 1.0kb downstream 1.0kb downstream 1000 false chr1: 21778200-21779199 Medicago truncatula
Medtr1g059080 2.0kb upstream 2.0kb upstream 3935 true chr1: 21774265-21778199 Medicago truncatula
Medtr1g059080 2.0kb upstream 2.0kb upstream 2000 false chr1: 21774265-21776264 Medicago truncatula
Medtr1g059080 2.0kb downstream 2.0kb downstream 3935 true chr1: 21776265-21780199 Medicago truncatula
Medtr1g059080 2.0kb downstream 2.0kb downstream 2000 false chr1: 21778200-21780199 Medicago truncatula
Medtr1g059080 5.0kb upstream 5.0kb upstream 6935 true chr1: 21771265-21778199 Medicago truncatula
Medtr1g059080 5.0kb upstream 5.0kb upstream 5000 false chr1: 21771265-21776264 Medicago truncatula
Medtr1g059080 5.0kb downstream 5.0kb downstream 6935 true chr1: 21776265-21783199 Medicago truncatula
Medtr1g059080 5.0kb downstream 5.0kb downstream 5000 false chr1: 21778200-21783199 Medicago truncatula
Medtr1g059080 10.0kb upstream 10.0kb upstream 11935 true chr1: 21766265-21778199 Medicago truncatula
Medtr1g059080 10.0kb upstream 10.0kb upstream 10000 false chr1: 21766265-21776264 Medicago truncatula
Medtr1g059080 10.0kb downstream 10.0kb downstream 11935 true chr1: 21776265-21788199 Medicago truncatula
Medtr1g059080 10.0kb downstream 10.0kb downstream 10000 false chr1: 21778200-21788199 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297477 5265 Fabidae View MSA
124042699 5270 Rosid View MSA
123751158 5271 Pentapetalae View MSA
122794287 5272 Eudicot View MSA
122046901 5273 Angiosperm View MSA
123429121 5275 Viridiplantae View MSA
121350674 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.038        
cufflinks 0.482        
cufflinks 0.248       Low
cufflinks 2.779       High
cufflinks 0.555        
cufflinks 0.563        
cufflinks 2.299       High
cufflinks 0.305       Low
cufflinks 0.645        

0 Strain