Gene : Medtr1g058380 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR32285:SF53 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 8-RELATED Description:  Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein
Genomic Order:  3118 Name:  ? Medtr1g058380
Secondary Identifier:  ? PAC:31100835
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g058380 0.5kb upstream 0.5kb upstream 3569 true chr1: 25704158-25707726 Medicago truncatula
Medtr1g058380 0.5kb upstream 0.5kb upstream 500 false chr1: 25704158-25704657 Medicago truncatula
Medtr1g058380 0.5kb downstream 0.5kb downstream 3569 true chr1: 25704658-25708226 Medicago truncatula
Medtr1g058380 0.5kb downstream 0.5kb downstream 500 false chr1: 25707727-25708226 Medicago truncatula
Medtr1g058380 1.0kb upstream 1.0kb upstream 4069 true chr1: 25703658-25707726 Medicago truncatula
Medtr1g058380 1.0kb upstream 1.0kb upstream 1000 false chr1: 25703658-25704657 Medicago truncatula
Medtr1g058380 1.0kb downstream 1.0kb downstream 4069 true chr1: 25704658-25708726 Medicago truncatula
Medtr1g058380 1.0kb downstream 1.0kb downstream 1000 false chr1: 25707727-25708726 Medicago truncatula
Medtr1g058380 2.0kb upstream 2.0kb upstream 5069 true chr1: 25702658-25707726 Medicago truncatula
Medtr1g058380 2.0kb upstream 2.0kb upstream 2000 false chr1: 25702658-25704657 Medicago truncatula
Medtr1g058380 2.0kb downstream 2.0kb downstream 5069 true chr1: 25704658-25709726 Medicago truncatula
Medtr1g058380 2.0kb downstream 2.0kb downstream 2000 false chr1: 25707727-25709726 Medicago truncatula
Medtr1g058380 5.0kb upstream 5.0kb upstream 8069 true chr1: 25699658-25707726 Medicago truncatula
Medtr1g058380 5.0kb upstream 5.0kb upstream 5000 false chr1: 25699658-25704657 Medicago truncatula
Medtr1g058380 5.0kb downstream 5.0kb downstream 8069 true chr1: 25704658-25712726 Medicago truncatula
Medtr1g058380 5.0kb downstream 5.0kb downstream 5000 false chr1: 25707727-25712726 Medicago truncatula
Medtr1g058380 10.0kb upstream 10.0kb upstream 13069 true chr1: 25694658-25707726 Medicago truncatula
Medtr1g058380 10.0kb upstream 10.0kb upstream 10000 false chr1: 25694658-25704657 Medicago truncatula
Medtr1g058380 10.0kb downstream 10.0kb downstream 13069 true chr1: 25704658-25717726 Medicago truncatula
Medtr1g058380 10.0kb downstream 10.0kb downstream 10000 false chr1: 25707727-25717726 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302332 5265 Fabidae View MSA
124060600 5270 Rosid View MSA
123745624 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.012     Low  
cufflinks 0.04     Low  
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.053     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.027     Low  
cufflinks 0.012     Low  

0 Strain