Gene : Medtr1g059960 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR18952:SF100 - ALPHA CARBONIC ANHYDRASE 5 Description:  eukaryotic-type carbonic anhydrase
Genomic Order:  3163 Name:  ? Medtr1g059960
Secondary Identifier:  ? PAC:31094713
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula CYANCAT-PWY Medicago truncatula pathologic  
Mtruncatula PWY-241 Medicago truncatula pathologic  
Mtruncatula PWY-7115 Medicago truncatula pathologic  
Mtruncatula PWY-7117 Medicago truncatula pathologic  
Mtruncatula PWYQT-4429 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g059960 0.5kb upstream 0.5kb upstream 3373 true chr1: 26103090-26106462 Medicago truncatula
Medtr1g059960 0.5kb upstream 0.5kb upstream 500 false chr1: 26105963-26106462 Medicago truncatula
Medtr1g059960 0.5kb downstream 0.5kb downstream 3373 true chr1: 26102590-26105962 Medicago truncatula
Medtr1g059960 0.5kb downstream 0.5kb downstream 500 false chr1: 26102590-26103089 Medicago truncatula
Medtr1g059960 1.0kb upstream 1.0kb upstream 3873 true chr1: 26103090-26106962 Medicago truncatula
Medtr1g059960 1.0kb upstream 1.0kb upstream 1000 false chr1: 26105963-26106962 Medicago truncatula
Medtr1g059960 1.0kb downstream 1.0kb downstream 3873 true chr1: 26102090-26105962 Medicago truncatula
Medtr1g059960 1.0kb downstream 1.0kb downstream 1000 false chr1: 26102090-26103089 Medicago truncatula
Medtr1g059960 2.0kb upstream 2.0kb upstream 4873 true chr1: 26103090-26107962 Medicago truncatula
Medtr1g059960 2.0kb upstream 2.0kb upstream 2000 false chr1: 26105963-26107962 Medicago truncatula
Medtr1g059960 2.0kb downstream 2.0kb downstream 4873 true chr1: 26101090-26105962 Medicago truncatula
Medtr1g059960 2.0kb downstream 2.0kb downstream 2000 false chr1: 26101090-26103089 Medicago truncatula
Medtr1g059960 5.0kb upstream 5.0kb upstream 7873 true chr1: 26103090-26110962 Medicago truncatula
Medtr1g059960 5.0kb upstream 5.0kb upstream 5000 false chr1: 26105963-26110962 Medicago truncatula
Medtr1g059960 5.0kb downstream 5.0kb downstream 7873 true chr1: 26098090-26105962 Medicago truncatula
Medtr1g059960 5.0kb downstream 5.0kb downstream 5000 false chr1: 26098090-26103089 Medicago truncatula
Medtr1g059960 10.0kb upstream 10.0kb upstream 12873 true chr1: 26103090-26115962 Medicago truncatula
Medtr1g059960 10.0kb upstream 10.0kb upstream 10000 false chr1: 26105963-26115962 Medicago truncatula
Medtr1g059960 10.0kb downstream 10.0kb downstream 12873 true chr1: 26093090-26105962 Medicago truncatula
Medtr1g059960 10.0kb downstream 10.0kb downstream 10000 false chr1: 26093090-26103089 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301331 5265 Fabidae View MSA
124069270 5270 Rosid View MSA
123746291 5271 Pentapetalae View MSA
122797456 5272 Eudicot View MSA
122049694 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.305       High
cufflinks 3.377        
cufflinks 1.62        
cufflinks 0.013     Low Low
cufflinks 3.03        
cufflinks 0.078     Low  
cufflinks 0.079        
cufflinks 1.76        
cufflinks 0.196        

0 Strain