Gene : Medtr1g062740 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23086:SF42 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 9 Description:  phosphatidylinositol-4-phosphate 5-kinase family protein
Genomic Order:  3321 Name:  ? Medtr1g062740
Secondary Identifier:  ? PAC:31098414
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6351 Medicago truncatula pathologic  
Mtruncatula PWY-6352 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g062740 0.5kb upstream 0.5kb upstream 9544 true chr1: 27469812-27479355 Medicago truncatula
Medtr1g062740 0.5kb upstream 0.5kb upstream 500 false chr1: 27469812-27470311 Medicago truncatula
Medtr1g062740 0.5kb downstream 0.5kb downstream 9544 true chr1: 27470312-27479855 Medicago truncatula
Medtr1g062740 0.5kb downstream 0.5kb downstream 500 false chr1: 27479356-27479855 Medicago truncatula
Medtr1g062740 1.0kb upstream 1.0kb upstream 10044 true chr1: 27469312-27479355 Medicago truncatula
Medtr1g062740 1.0kb upstream 1.0kb upstream 1000 false chr1: 27469312-27470311 Medicago truncatula
Medtr1g062740 1.0kb downstream 1.0kb downstream 10044 true chr1: 27470312-27480355 Medicago truncatula
Medtr1g062740 1.0kb downstream 1.0kb downstream 1000 false chr1: 27479356-27480355 Medicago truncatula
Medtr1g062740 2.0kb upstream 2.0kb upstream 11044 true chr1: 27468312-27479355 Medicago truncatula
Medtr1g062740 2.0kb upstream 2.0kb upstream 2000 false chr1: 27468312-27470311 Medicago truncatula
Medtr1g062740 2.0kb downstream 2.0kb downstream 11044 true chr1: 27470312-27481355 Medicago truncatula
Medtr1g062740 2.0kb downstream 2.0kb downstream 2000 false chr1: 27479356-27481355 Medicago truncatula
Medtr1g062740 5.0kb upstream 5.0kb upstream 14044 true chr1: 27465312-27479355 Medicago truncatula
Medtr1g062740 5.0kb upstream 5.0kb upstream 5000 false chr1: 27465312-27470311 Medicago truncatula
Medtr1g062740 5.0kb downstream 5.0kb downstream 14044 true chr1: 27470312-27484355 Medicago truncatula
Medtr1g062740 5.0kb downstream 5.0kb downstream 5000 false chr1: 27479356-27484355 Medicago truncatula
Medtr1g062740 10.0kb upstream 10.0kb upstream 19044 true chr1: 27460312-27479355 Medicago truncatula
Medtr1g062740 10.0kb upstream 10.0kb upstream 10000 false chr1: 27460312-27470311 Medicago truncatula
Medtr1g062740 10.0kb downstream 10.0kb downstream 19044 true chr1: 27470312-27489355 Medicago truncatula
Medtr1g062740 10.0kb downstream 10.0kb downstream 10000 false chr1: 27479356-27489355 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026416 5273 Angiosperm View MSA
122302421 5265 Fabidae View MSA
124066368 5270 Rosid View MSA
123738623 5271 Pentapetalae View MSA
122790616 5272 Eudicot View MSA
121350823 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.589        
cufflinks 4.309       High
cufflinks 2.713        
cufflinks 0.718       Low
cufflinks 3.141        
cufflinks 0.793       Low
cufflinks 1.888        
cufflinks 2.249        
cufflinks 2.566        

0 Strain