Gene : Medtr1g047200 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG3219 - Transcription initiation factor TFIID, subunit TAF11 Description:  transcription initiation factor TFIID, subunit TAF11
Genomic Order:  2343 Name:  ? Medtr1g047200
Secondary Identifier:  ? PAC:31097993
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g047200 0.5kb upstream 0.5kb upstream 3601 true chr1: 17814115-17817715 Medicago truncatula
Medtr1g047200 0.5kb upstream 0.5kb upstream 500 false chr1: 17814115-17814614 Medicago truncatula
Medtr1g047200 0.5kb downstream 0.5kb downstream 3601 true chr1: 17814615-17818215 Medicago truncatula
Medtr1g047200 0.5kb downstream 0.5kb downstream 500 false chr1: 17817716-17818215 Medicago truncatula
Medtr1g047200 1.0kb upstream 1.0kb upstream 4101 true chr1: 17813615-17817715 Medicago truncatula
Medtr1g047200 1.0kb upstream 1.0kb upstream 1000 false chr1: 17813615-17814614 Medicago truncatula
Medtr1g047200 1.0kb downstream 1.0kb downstream 4101 true chr1: 17814615-17818715 Medicago truncatula
Medtr1g047200 1.0kb downstream 1.0kb downstream 1000 false chr1: 17817716-17818715 Medicago truncatula
Medtr1g047200 2.0kb upstream 2.0kb upstream 5101 true chr1: 17812615-17817715 Medicago truncatula
Medtr1g047200 2.0kb upstream 2.0kb upstream 2000 false chr1: 17812615-17814614 Medicago truncatula
Medtr1g047200 2.0kb downstream 2.0kb downstream 5101 true chr1: 17814615-17819715 Medicago truncatula
Medtr1g047200 2.0kb downstream 2.0kb downstream 2000 false chr1: 17817716-17819715 Medicago truncatula
Medtr1g047200 5.0kb upstream 5.0kb upstream 8101 true chr1: 17809615-17817715 Medicago truncatula
Medtr1g047200 5.0kb upstream 5.0kb upstream 5000 false chr1: 17809615-17814614 Medicago truncatula
Medtr1g047200 5.0kb downstream 5.0kb downstream 8101 true chr1: 17814615-17822715 Medicago truncatula
Medtr1g047200 5.0kb downstream 5.0kb downstream 5000 false chr1: 17817716-17822715 Medicago truncatula
Medtr1g047200 10.0kb upstream 10.0kb upstream 13101 true chr1: 17804615-17817715 Medicago truncatula
Medtr1g047200 10.0kb upstream 10.0kb upstream 10000 false chr1: 17804615-17814614 Medicago truncatula
Medtr1g047200 10.0kb downstream 10.0kb downstream 13101 true chr1: 17814615-17827715 Medicago truncatula
Medtr1g047200 10.0kb downstream 10.0kb downstream 10000 false chr1: 17817716-17827715 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305484 5265 Fabidae View MSA
124061468 5270 Rosid View MSA
123741122 5271 Pentapetalae View MSA
122793887 5272 Eudicot View MSA
122046222 5273 Angiosperm View MSA
121348235 5274 Embryophyte View MSA
123426477 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.898        
cufflinks 7.682        
cufflinks 6.62        
cufflinks 4.543        
cufflinks 9.891       High
cufflinks 2.079       Low
cufflinks 4.314        
cufflinks 6.126        
cufflinks 3.955        

0 Strain