Gene : Medtr1g047550 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR11945:SF229 - F23H11.23 PROTEIN-RELATED Description:  MADS-box transcription factor family protein
Genomic Order:  2360 Name:  ? Medtr1g047550
Secondary Identifier:  ? PAC:31094111
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g047550 0.5kb upstream 0.5kb upstream 1040 true chr1: 17978299-17979338 Medicago truncatula
Medtr1g047550 0.5kb upstream 0.5kb upstream 500 false chr1: 17978299-17978798 Medicago truncatula
Medtr1g047550 0.5kb downstream 0.5kb downstream 1040 true chr1: 17978799-17979838 Medicago truncatula
Medtr1g047550 0.5kb downstream 0.5kb downstream 500 false chr1: 17979339-17979838 Medicago truncatula
Medtr1g047550 1.0kb upstream 1.0kb upstream 1540 true chr1: 17977799-17979338 Medicago truncatula
Medtr1g047550 1.0kb upstream 1.0kb upstream 1000 false chr1: 17977799-17978798 Medicago truncatula
Medtr1g047550 1.0kb downstream 1.0kb downstream 1540 true chr1: 17978799-17980338 Medicago truncatula
Medtr1g047550 1.0kb downstream 1.0kb downstream 1000 false chr1: 17979339-17980338 Medicago truncatula
Medtr1g047550 2.0kb upstream 2.0kb upstream 2540 true chr1: 17976799-17979338 Medicago truncatula
Medtr1g047550 2.0kb upstream 2.0kb upstream 2000 false chr1: 17976799-17978798 Medicago truncatula
Medtr1g047550 2.0kb downstream 2.0kb downstream 2540 true chr1: 17978799-17981338 Medicago truncatula
Medtr1g047550 2.0kb downstream 2.0kb downstream 2000 false chr1: 17979339-17981338 Medicago truncatula
Medtr1g047550 5.0kb upstream 5.0kb upstream 5540 true chr1: 17973799-17979338 Medicago truncatula
Medtr1g047550 5.0kb upstream 5.0kb upstream 5000 false chr1: 17973799-17978798 Medicago truncatula
Medtr1g047550 5.0kb downstream 5.0kb downstream 5540 true chr1: 17978799-17984338 Medicago truncatula
Medtr1g047550 5.0kb downstream 5.0kb downstream 5000 false chr1: 17979339-17984338 Medicago truncatula
Medtr1g047550 10.0kb upstream 10.0kb upstream 10540 true chr1: 17968799-17979338 Medicago truncatula
Medtr1g047550 10.0kb upstream 10.0kb upstream 10000 false chr1: 17968799-17978798 Medicago truncatula
Medtr1g047550 10.0kb downstream 10.0kb downstream 10540 true chr1: 17978799-17989338 Medicago truncatula
Medtr1g047550 10.0kb downstream 10.0kb downstream 10000 false chr1: 17979339-17989338 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311335 5265 Fabidae View MSA
124050462 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.015        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain