Gene : Medtr1g050530 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF09366 - Protein of unknown function (DUF1997) (DUF1997) Description:  RAP annotation release 2, galactose-binding-like domain protein
Genomic Order:  2555 Name:  ? Medtr1g050530
Secondary Identifier:  ? PAC:31096092
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g050530 0.5kb upstream 0.5kb upstream 5538 true chr1: 19698637-19704174 Medicago truncatula
Medtr1g050530 0.5kb upstream 0.5kb upstream 500 false chr1: 19703675-19704174 Medicago truncatula
Medtr1g050530 0.5kb downstream 0.5kb downstream 5538 true chr1: 19698137-19703674 Medicago truncatula
Medtr1g050530 0.5kb downstream 0.5kb downstream 500 false chr1: 19698137-19698636 Medicago truncatula
Medtr1g050530 1.0kb upstream 1.0kb upstream 6038 true chr1: 19698637-19704674 Medicago truncatula
Medtr1g050530 1.0kb upstream 1.0kb upstream 1000 false chr1: 19703675-19704674 Medicago truncatula
Medtr1g050530 1.0kb downstream 1.0kb downstream 6038 true chr1: 19697637-19703674 Medicago truncatula
Medtr1g050530 1.0kb downstream 1.0kb downstream 1000 false chr1: 19697637-19698636 Medicago truncatula
Medtr1g050530 2.0kb upstream 2.0kb upstream 7038 true chr1: 19698637-19705674 Medicago truncatula
Medtr1g050530 2.0kb upstream 2.0kb upstream 2000 false chr1: 19703675-19705674 Medicago truncatula
Medtr1g050530 2.0kb downstream 2.0kb downstream 7038 true chr1: 19696637-19703674 Medicago truncatula
Medtr1g050530 2.0kb downstream 2.0kb downstream 2000 false chr1: 19696637-19698636 Medicago truncatula
Medtr1g050530 5.0kb upstream 5.0kb upstream 10038 true chr1: 19698637-19708674 Medicago truncatula
Medtr1g050530 5.0kb upstream 5.0kb upstream 5000 false chr1: 19703675-19708674 Medicago truncatula
Medtr1g050530 5.0kb downstream 5.0kb downstream 10038 true chr1: 19693637-19703674 Medicago truncatula
Medtr1g050530 5.0kb downstream 5.0kb downstream 5000 false chr1: 19693637-19698636 Medicago truncatula
Medtr1g050530 10.0kb upstream 10.0kb upstream 15038 true chr1: 19698637-19713674 Medicago truncatula
Medtr1g050530 10.0kb upstream 10.0kb upstream 10000 false chr1: 19703675-19713674 Medicago truncatula
Medtr1g050530 10.0kb downstream 10.0kb downstream 15038 true chr1: 19688637-19703674 Medicago truncatula
Medtr1g050530 10.0kb downstream 10.0kb downstream 10000 false chr1: 19688637-19698636 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304058 5265 Fabidae View MSA
124068391 5270 Rosid View MSA
123740182 5271 Pentapetalae View MSA
122791833 5272 Eudicot View MSA
122045233 5273 Angiosperm View MSA
121346827 5274 Embryophyte View MSA
123423879 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.089       Low
cufflinks 2.219        
cufflinks 2.044        
cufflinks 0.242        
cufflinks 3.13       High
cufflinks 0.082     Low Low
cufflinks 0.227        
cufflinks 2.17        
cufflinks 0.123        

0 Strain