Gene : Medtr1g050472 M. truncatula Mt4.0v1
Defline:  (1 of 9) 1.17.4.1 - Ribonucleoside-diphosphate reductase / Ribonucleotide reductase Description:  ribonucleoside-diphosphate reductase small chain
Genomic Order:  2518 Name:  ? Medtr1g050472
Secondary Identifier:  ? PAC:31097072
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12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6126 Medicago truncatula pathologic  
Mtruncatula PWY-6545 Medicago truncatula pathologic  
Mtruncatula PWY-7184 Medicago truncatula pathologic  
Mtruncatula PWY-7210 Medicago truncatula pathologic  
Mtruncatula PWY-7211 Medicago truncatula pathologic  
Mtruncatula PWY-7220 Medicago truncatula pathologic  
Mtruncatula PWY-7222 Medicago truncatula pathologic  
Mtruncatula PWY-7226 Medicago truncatula pathologic  
Mtruncatula PWY-7227 Medicago truncatula pathologic  
Mtruncatula PWY-7228 Medicago truncatula pathologic  
Mtruncatula PWY-7229 Medicago truncatula pathologic  
Mtruncatula PWY-841 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g050472 0.5kb upstream 0.5kb upstream 2455 true chr1: 19456021-19458475 Medicago truncatula
Medtr1g050472 0.5kb upstream 0.5kb upstream 500 false chr1: 19456021-19456520 Medicago truncatula
Medtr1g050472 0.5kb downstream 0.5kb downstream 2455 true chr1: 19456521-19458975 Medicago truncatula
Medtr1g050472 0.5kb downstream 0.5kb downstream 500 false chr1: 19458476-19458975 Medicago truncatula
Medtr1g050472 1.0kb upstream 1.0kb upstream 2955 true chr1: 19455521-19458475 Medicago truncatula
Medtr1g050472 1.0kb upstream 1.0kb upstream 1000 false chr1: 19455521-19456520 Medicago truncatula
Medtr1g050472 1.0kb downstream 1.0kb downstream 2955 true chr1: 19456521-19459475 Medicago truncatula
Medtr1g050472 1.0kb downstream 1.0kb downstream 1000 false chr1: 19458476-19459475 Medicago truncatula
Medtr1g050472 2.0kb upstream 2.0kb upstream 3955 true chr1: 19454521-19458475 Medicago truncatula
Medtr1g050472 2.0kb upstream 2.0kb upstream 2000 false chr1: 19454521-19456520 Medicago truncatula
Medtr1g050472 2.0kb downstream 2.0kb downstream 3955 true chr1: 19456521-19460475 Medicago truncatula
Medtr1g050472 2.0kb downstream 2.0kb downstream 2000 false chr1: 19458476-19460475 Medicago truncatula
Medtr1g050472 5.0kb upstream 5.0kb upstream 6955 true chr1: 19451521-19458475 Medicago truncatula
Medtr1g050472 5.0kb upstream 5.0kb upstream 5000 false chr1: 19451521-19456520 Medicago truncatula
Medtr1g050472 5.0kb downstream 5.0kb downstream 6955 true chr1: 19456521-19463475 Medicago truncatula
Medtr1g050472 5.0kb downstream 5.0kb downstream 5000 false chr1: 19458476-19463475 Medicago truncatula
Medtr1g050472 10.0kb upstream 10.0kb upstream 11955 true chr1: 19446521-19458475 Medicago truncatula
Medtr1g050472 10.0kb upstream 10.0kb upstream 10000 false chr1: 19446521-19456520 Medicago truncatula
Medtr1g050472 10.0kb downstream 10.0kb downstream 11955 true chr1: 19456521-19468475 Medicago truncatula
Medtr1g050472 10.0kb downstream 10.0kb downstream 10000 false chr1: 19458476-19468475 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309353 5265 Fabidae View MSA
124067883 5270 Rosid View MSA
123737275 5271 Pentapetalae View MSA
122787137 5272 Eudicot View MSA
122041688 5273 Angiosperm View MSA
121344906 5274 Embryophyte View MSA
123428543 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.066     High High
cufflinks 8.569        
cufflinks 5.256        
cufflinks 8.393        
cufflinks 2.77       Low
cufflinks 9.763        
cufflinks 11.469     High  
cufflinks 7.127        
cufflinks 33.669     High High

0 Strain